| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4311466 = | 558 (1.250) | 25 (0.070) | 10/94 | NT | 5.8% | coding (48/453 nt) | phnG | ribophosphonate triphosphate synthase subunit |
| ? | CP009273 | 4311493 = | 346 (0.930) | coding (21/453 nt) | phnG | ribophosphonate triphosphate synthase subunit | |||||
Only 100 of 158 total aligned reads displayed.
CATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4311541‑4311466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctggcgGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCTG > CP009273/4311493‑4311559 CATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCG < 1:27340436/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:26821744/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:25535009/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:23641192/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT > 1:22447374/1‑68 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:2193152/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:36671955/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT < 1:37016779/68‑1 ATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT > 1:17718094/1‑68 TGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTG < 1:32003713/68‑1 TGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTG < 1:13969726/68‑1 TGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTG < 1:36155986/68‑1 GATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGC < 1:20196511/68‑1 GATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGC < 1:33089269/68‑1 GATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGT > 1:20707081/1‑66 TTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:28838605/1‑68 TTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:8742282/1‑68 TTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:10736234/1‑68 TTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCT < 1:10865463/67‑1 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCCCTGGATGTCCGTGCTG > 1:25949665/1‑67 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:25949645/1‑67 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:31086989/1‑67 TGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTG > 1:20460103/1‑67 GAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGC < 1:12112418/68‑1 GAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGC < 1:31751563/68‑1 GAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGC < 1:35181173/68‑1 GAATGCACTATGGAGCACTGAAGGCACGCAGATCCCTCGACCCGCCAGCACTGGATGTCCGGGCTGGC < 1:33102445/68‑1 taaGGAGCACTGAATGCCCGCAGATCCCGCGACCCGCCACCACTGGATGTCCGTGCTGGCGGGTCGCG < 1:20153093/65‑1 aATGGAGCACCGAATGCACGCAGAGACCGCGACCCGCCAGCACTGGATGTCCGTGCGGGCGGGTCGCG < 1:19177240/67‑1 TATGGCGCACTGAATGCCCGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCG < 1:17304648/68‑1 TATGGAGCACTGAATGCACGCAGATCCCGCGACCCGCCAGCACTGGATGGCCGGGCTGGCGGGTCGCG < 1:25299495/68‑1 TATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCG < 1:25342846/68‑1 TATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGAGGGCCGTGCTGGCGGGTCGCG < 1:6817932/68‑1 TATGGACCACTGAATGCCCGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCG < 1:3882520/68‑1 ACTGAACGCACGCAGAGACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTG < 1:2788212/67‑1 ctcAATCCACGCAGATACCGCGACCCGCCACCACTGGATGTCCGTGCGGGCGGGTCGCGGTATCTGCG < 1:16312069/65‑1 CTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCGGGCGGGTCGCGGTATCTGCG < 1:34139583/68‑1 TACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCC < 1:5690494/68‑1 TACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGC < 1:2235832/65‑1 ACCGCGACCCGCCAGCACGGGGAGCCCGTGCTGGCGGGTCGCGGGTTCTGCGTGCATTCAGTGCTCCA > 1:7922362/1‑68 CCAGCACTGGCGGGCCCTGCGGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCA < 1:4250173/68‑1 CCAGCACTGCAGGCCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCA < 1:5834661/68‑1 AGCACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAA > 1:35580347/1‑67 ACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCAT > 1:32547391/1‑68 ACTGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCAT > 1:2749096/1‑68 ACTGGATGTCCGTGCTGGAGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCAGAGTGAATTCAATCAT > 1:13404473/1‑68 TGGATGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATG > 1:33035770/1‑67 TGTCCGTGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGC > 1:9345537/1‑68 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:31336614/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:36076544/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:5308916/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:6446658/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:29362946/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:9543836/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:20784860/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:19565572/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:23090087/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:17908722/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:25799385/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG > 1:23270067/1‑67 TGCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGAGT > 1:25388438/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGgc > 1:18493353/1‑66 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:21610756/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:18799146/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:33149501/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:22201153/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:32984127/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:5798958/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:24652254/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:6353575/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:2969684/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:17213873/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTC > 1:6743294/1‑68 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG < 1:19710313/66‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG < 1:10097590/66‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG < 1:1845417/66‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCG < 1:1538806/66‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGC < 1:21747565/65‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGC < 1:28337433/65‑1 GCTGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGC < 1:3629843/65‑1 TGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG < 1:28663819/68‑1 TGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG < 1:36267939/68‑1 TGGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCA < 1:12321759/67‑1 GGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGG < 1:19116664/68‑1 GGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGG < 1:24222299/68‑1 GGCGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGG < 1:29595562/68‑1 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:30806223/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:28567437/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:10231437/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:8848036/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:28522061/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:7457042/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:16675137/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:28996201/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:1808419/1‑65 CGGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAG > 1:35492422/1‑65 GGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCTG < 1:26987421/68‑1 GGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCTG < 1:33292981/68‑1 GGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCTG > 1:34109500/1‑68 GGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCT < 1:2147374/67‑1 CATGATTGAATTCACTATGGAGCACTGAATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4311541‑4311466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctggcgGGTCGCGGTATCTGCGTGCATTCAGTGCTCCATAGTGAATTCAATCATGTCGGCGCGCGTCAGGCTG > CP009273/4311493‑4311559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |