| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 442673 = | 353 (0.790) | 34 (0.100) | 11/90 | NT | 9.1% | coding (489/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | 442734 = | 396 (1.110) | coding (428/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 171 total aligned reads displayed.
TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/442749‑442673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcagcgCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA > CP009273/442734‑442800 TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:10207010/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:27691153/1‑68TTGGTGCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC < 1:30527065/68‑1 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:6104932/1‑68 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGG < 1:5299506/68‑1 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:31840028/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:3105215/1‑67 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCG > 1:36498603/1‑68 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:14534956/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:33778624/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC > 1:16908800/1‑67 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:19544831/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:15474095/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC > 1:7000995/1‑67 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC > 1:12740922/1‑67 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:8678888/67‑1 TTCGCTCTCCCGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:18482401/67‑1 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:22737381/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:26786423/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCG < 1:36329856/67‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:20782076/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:17315603/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:33399776/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:26322995/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:3865178/68‑1 GCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:8171827/67‑1 gCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:30245136/66‑1 TCTCGGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:22987129/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:17976283/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:16583018/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG < 1:31682144/68‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:21894082/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG < 1:2907526/68‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:8800351/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:16435843/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:16251102/67‑1 CTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGC < 1:12756665/68‑1 TCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCC < 1:1704361/68‑1 TCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGC < 1:4777491/67‑1 TCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGACCGCGATAGCGGCGCAGCGC < 1:12261185/67‑1 CGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGG < 1:35188993/68‑1 CGCCGCCGGTGATCGGCTACTCCGCGGTAACCGGTGAGTTCGAAACCGGCGCAGCGCCGGAGAGCGA < 1:26314507/67‑1 CGCCGGTGATCCGCACCTGCGCGGTAACCGGTGAGTTCGTTACCGGCGCAGCGCCGGAGAGCGAACCA < 1:35877642/68‑1 GCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAA < 1:10953806/68‑1 GCCGGTGATCGGCTACGGGGCGGTACCCGGCGAGTGCGATAGCGGCGCAGCGCCGGAGAGCGAACCAA < 1:1149905/68‑1 GCCGGTGATCGGCAACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAA < 1:4047023/68‑1 GCCGGTGAGCGGCTACTGGGCGGTAACCGGTGAGATCGATAGCGCCGCAGCGCCGGAGAGCGAACCAA < 1:36430395/68‑1 TCGGCTACTGTGCGGCAACCGGTGAGTGCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGT < 1:21574429/67‑1 CGGCTCCTGCGCGGTAACCGGGGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:22430935/68‑1 CGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:36299344/68‑1 CGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:8747269/68‑1 CGGCTACTGCGCGGCAACCGGTGAGTCCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:14507710/68‑1 CGGCTACTGCGCGCTAACCGGGGAGTCCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:21158530/68‑1 GGCTAGCGTGCGGTAACCGGTGAGTGCGATCGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:32029850/67‑1 GGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:22300011/67‑1 GGCTACGGTCCGGTAACCGGTGAGTCCGATCGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:689670/67‑1 TACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTA < 1:33757226/68‑1 cCTGGGCGGTAACCGGTGCGTCCGCTAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAG < 1:24167389/67‑1 cCTGGGCGGTAACCGGGGAGTTCGAAAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAG < 1:24885284/67‑1 caAGCGGCGCCGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGG < 1:16207163/66‑1 atcGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGG < 1:19133786/65‑1 atcGCGCCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGG < 1:24773638/65‑1 TAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGG < 1:33962956/67‑1 GCGGCGCAGCGCCGGAGAGCGAACCAATCATCGTGCCGTAGACAGAGTGGCGTTTCATGTACCGGCTt > 1:35451639/1‑67 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:29459094/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:479192/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:20392623/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:1990518/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:29229810/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:28220469/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:34372327/1‑68 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:1166818/67‑1 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:5084388/67‑1 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:13971995/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATA > 1:9471244/1‑68 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:11032332/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:14494022/67‑1 CGCAGCGCCGGAGAGCGAACCAATCAACGTGCGGTAGACAGAGTGGCGTTTCATGTACAGGCTATAA > 1:922483/1‑67 CGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAA > 1:3887699/1‑67 CGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTGTCATGTACAGGCTATAA > 1:5527470/1‑67 GCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAAC > 1:13414781/1‑68 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:9147396/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:18793716/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:19260304/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:32766139/67‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:18238858/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:5587496/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:33116057/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:25414330/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:29786226/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:23739495/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:23480164/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:15184028/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:9846437/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:25897846/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:9069063/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:27681511/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:31484624/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCC < 1:20652312/66‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGGGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:15155894/68‑1 TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/442749‑442673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcagcgCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA > CP009273/442734‑442800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |