| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 301 (0.680) | 14 (0.040) | 7/94 | NT | 5.7% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 207 (0.550) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
CCGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314837‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 CCGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTA > 1:32865271/1‑67 CGGATTATCTGCTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACC < 1:14254453/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:10564964/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:9778229/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:4782792/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:36014642/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:35383935/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:28510326/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:26453019/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:25552572/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:25014895/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:17481372/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:11541449/68‑1 ATTATCTGTTTGCTGATATCGTCGGTTCTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:21974315/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:807748/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:82766/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:19361869/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:33193872/67‑1 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:25675196/67‑1 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:25837824/67‑1 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGGATCAATATTTCTACCGCC > 1:27511341/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGAGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:10933685/1‑68 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCA < 1:5155921/68‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCA < 1:19441354/68‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCA < 1:19397883/68‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC < 1:9723996/67‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC < 1:4824905/67‑1 TATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG > 1:17575927/1‑68 TATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG < 1:2925672/68‑1 TATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG > 1:3692466/1‑68 TATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAG > 1:17618278/1‑68 ATCTGTTTGCTGGTATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:3828126/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:491146/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:24321660/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:22350643/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:2373898/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:33613314/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:35491432/68‑1 ATCTGATTGCTGATATCGTCGGTACTCGCGGTGACGGCAGCAACAGTATCAAAATTTCTACCGCCAGT < 1:26819749/68‑1 TCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT > 1:36546191/1‑67 TCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT > 1:29658818/1‑67 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:8951807/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:14578897/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:5680485/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:24195821/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:1691323/67‑1 TTGCCGACATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:34634995/67‑1 TGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACG < 1:26948859/68‑1 GCTGATATCGGCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGA < 1:32946550/68‑1 CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCA < 1:25408212/68‑1 ggcACTGGCGGGGACGGCAGCAACAGTATCAATATTTCAACCGCCAGTACCGACGATATCAGCAAACA < 1:19086595/65‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTCCCGCCAGTACCGACGATATCAGCAAACA < 1:21435228/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:33425661/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:36040817/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:31182185/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:15766373/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:2402380/68‑1 GGTACGGGCGGTGACGGCAGCAACAGTATCAATATATCTACCGCCAGTACCGACGATATCAGCAAACA < 1:21541271/68‑1 TACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAG < 1:9588453/67‑1 GGCAGCAACAGCACCAATATTTCACCCCCCAGTACCGACGATATCCGCAAACAGATAATCCGGGCGCG < 1:34390290/68‑1 ATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCT > 1:21234487/1‑67 CCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTA > 1:20066554/1‑67 CGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGC < 1:2200998/68‑1 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTTCAGTAGCGC > 1:22628093/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:5482591/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:17527447/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:12121535/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:32338504/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:14810252/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:9281348/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:25981790/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:24723089/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:18886831/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:17816124/1‑68 CAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCG < 1:14910113/68‑1 CAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCG < 1:6968179/68‑1 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:10381183/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:4812859/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:35732473/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:27741838/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:27067864/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:16685571/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:20798432/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:18326924/1‑68 CCGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314837‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |