| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 301 (0.680) | 14 (0.040) | 7/94 | NT | 5.7% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 207 (0.550) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 409 total aligned reads displayed.
ATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAT > CP009273/1314696‑1314830 | aaccgcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggta > 1:35732473‑M1/68‑68 (MQ=255) tACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTg < 1:21164274/68‑1 (MQ=255) tACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTg > 1:17179228/1‑68 (MQ=255) gcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTgg > 1:5482591‑M1/64‑68 (MQ=255) gcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTgg > 1:18886831‑M1/64‑68 (MQ=255) aCTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTgg < 1:35237718/68‑1 (MQ=255) aCTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTgg < 1:8964292/68‑1 (MQ=255) aCTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTg > 1:31011432/1‑67 (MQ=255) cTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGc > 1:8242571/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGCCAAACGCACTGGCg > 1:13292975/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:17737770/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg < 1:26481542/68‑1 (MQ=255) gctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTGGCg < 1:2200998‑M1/7‑1 (MQ=255) ggAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCgg > 1:15653194/1‑68 (MQ=255) ggAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCgg < 1:27226944/68‑1 (MQ=255) agaCGCTACGGTTGCCGTGTTTCTCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGt < 1:1009616/67‑1 (MQ=255) agaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGt < 1:36972009/67‑1 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa < 1:23862205/67‑1 (MQ=255) aCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa > 1:2494471/1‑68 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGaa < 1:29754999/68‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:32244916/67‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:12039054/67‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:28481712/67‑1 (MQ=255) gCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGaaa < 1:8783230/68‑1 (MQ=255) gCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGaaa < 1:34296224/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCATCCCACAGGCCTCGGCGACAAACGCACTGGCGGTAGAAata < 1:32697823/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:11675043/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:6125618/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:22430210/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:5137616/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:25488896/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:7704807/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:14040312/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGCCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:12931214/68‑1 (MQ=255) aCGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAatat < 1:15958487/68‑1 (MQ=255) ggTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTg > 1:3967199/1‑68 (MQ=255) gTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATAtt > 1:34225096/1‑66 (MQ=255) ttGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGa < 1:17433227/67‑1 (MQ=255) tGCCGTGTTTCGCCACTTTCAGCCCACCGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt > 1:25764270/1‑67 (MQ=255) tGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt < 1:27830982/67‑1 (MQ=255) tGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt < 1:9144865/67‑1 (MQ=255) tGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATa < 1:13580551/68‑1 (MQ=255) ccGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt > 1:19462408/1‑65 (MQ=255) cGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt > 1:29218929/1‑64 (MQ=255) cGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTg < 1:20570711/68‑1 (MQ=255) gtgtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGt < 1:15019320/68‑1 (MQ=255) tgtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt > 1:7464761/1‑68 (MQ=255) gtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt < 1:15364727/67‑1 (MQ=255) gtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt < 1:19707243/67‑1 (MQ=255) ttCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt > 1:28214588/1‑65 (MQ=255) gCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGcc > 1:22830582/1‑68 (MQ=255) gCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGcc > 1:24548508/1‑68 (MQ=255) gCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGcc > 1:10891068/1‑68 (MQ=255) ccACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCg > 1:181304/1‑68 (MQ=255) ccACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCg > 1:23221155/1‑68 (MQ=255) cACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCg > 1:36081222/1‑67 (MQ=255) cACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCg > 1:23445041/1‑67 (MQ=255) cACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGt < 1:28737474/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:17882587/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:3510510/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:1377684/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:3351122/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:35466917/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:30278697/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:29011488/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:18686959/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:25319041/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:6522279/68‑1 (MQ=255) cccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAg > 1:29649713/1‑68 (MQ=255) cccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAg > 1:714495/1‑68 (MQ=255) cccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAg > 1:5959309/1‑68 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:30072953/68‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt > 1:16992339/1‑68 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt > 1:3766418/1‑68 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:21077835/68‑1 (MQ=255) cacaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt > 1:26042130/1‑67 (MQ=255) acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAc < 1:14440329/68‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTTGAAATATTGATACTGTTGCTGCCGTCCCCGCcagtgcc < 1:19086595‑M1/48‑4 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGATATATTGATACTGTTGCTGCCGTCACCGCCCGTAcc < 1:21541271‑M1/48‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg > 1:31558658/1‑68 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:6459103/67‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:5767237/67‑1 (MQ=255) gACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAg < 1:11514246/68‑1 (MQ=255) tcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGCCGATATCAGc < 1:32946550‑M1/60‑1 (MQ=255) cgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:26948859‑M1/61‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:23314091/68‑1 (MQ=255) aaaCGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCaa < 1:4902643/68‑1 (MQ=255) tcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATGTCGGCaa < 1:34634995‑M1/62‑1 (MQ=255) tcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCaa < 1:24195821‑M1/62‑1 (MQ=255) aCGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAAc > 1:3372331/1‑68 (MQ=255) cGCACTGGCGGTAGAATTATTGATACTGTTGCTGCCGGCACCGCCAGTACCGACGATATCAGCAAACa < 1:20380664/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:21951529/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:2127510/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:4534135/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:18483469/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:14671453/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:31213929/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:10488977/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGa > 1:36546191‑M1/1‑67 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:22350643‑M1/68‑1 (MQ=255) | ATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAT > CP009273/1314696‑1314830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |