| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2269311 = | 311 (0.700) | 35 (0.090) | 11/96 | NT | 11.9% | coding (560/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 2269347 = | 250 (0.660) | coding (596/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family | |||||
Only 100 of 131 total aligned reads displayed.
AGACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2269385‑2269311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC > CP009273/2269347‑2269411 ACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAATAACA > 1:20953278/1‑67 ACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:10869289/1‑67 ACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:28989868/1‑67 ACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:34591010/1‑67 ACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:36979048/1‑67 ACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:4055663/1‑67 ACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:4261988/1‑67 ACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:6118630/1‑67 ACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:743420/1‑67 AGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCG > 1:6065686/1‑68 AGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCG > 1:29041659/1‑68 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGATAGTAAAATAATCAAAAACAGCGTCG > 1:17045584/1‑68 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:11692644/1‑68 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG < 1:11465492/68‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG < 1:2904895/68‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:28135014/1‑68 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:28133798/1‑68 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGT < 1:11201207/66‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGT < 1:23649195/66‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:19004571/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:25748718/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:21168133/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:22376545/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:24056888/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:26883676/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:4489936/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:5721513/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:5744021/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:1845271/64‑1 AATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA < 1:4592165/62‑1 ATTGCCAGCAGCCCCCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGT < 1:2534592/68‑1 ATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGT < 1:5130871/68‑1 CAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACCGCGTCGTACAGC < 1:13180493/68‑1 CAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGC < 1:26015682/68‑1 CAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGC < 1:36893951/68‑1 CAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGC < 1:33776265/68‑1 CAGCAGCCACCAGAAGTTAGGCTGTACCACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGC < 1:23930254/68‑1 AGCCACCAGAAGTTAGGCTGTTGGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCC < 1:23413346/65‑1 AGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCC < 1:17560578/65‑1 AGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCC < 1:33615768/65‑1 AGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCC < 1:12023282/65‑1 CACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAA < 1:23435061/65‑1 CACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAA < 1:23295694/65‑1 CAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAACCAGCGTCGTACAGCCTAACTTCTG < 1:21352222/68‑1 CTGTACGACGCTGGAAAGTAAAATAATCAAAAACACCGGCGTACAGCCTAACTTCTGGTGGCTGCTGG < 1:22683661/68‑1 tgaACGACGCTGGAAAGTAAAATAATCAAAAACCGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGG < 1:16090422/64‑1 TGTACGCCGCTGGAAAGTAAAATAACCAAAACCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGG < 1:16318482/67‑1 TGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGGCGTACAGCCTAACTTCTGGTGGCTGCTGG < 1:17115376/67‑1 GTACCACGCTGGAAAGTAAAAAAATCAAAAACACCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCA < 1:25083793/68‑1 CGACGCTGGAAAGTAAAATAAACAAAAACAGCGGCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATT < 1:3295756/68‑1 CGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTAC < 1:6211080/67‑1 AAAATAATCAAAAACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGG < 1:15959767/68‑1 AAAATAATCAAAAACAGCGCCGAACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGG < 1:29441756/68‑1 AAAATAACCAAAAACCCCGTCGAACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGG < 1:36033117/68‑1 aAATCAAAAACAGCGTCGAACTGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGG < 1:14799239/67‑1 TAATCAAAAACCGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGG < 1:2937412/68‑1 CAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG < 1:30000518/68‑1 CAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG < 1:20880266/68‑1 CAGCGTCGTACAGCCTAACTTCTGGGGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG < 1:1014971/68‑1 AGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG > 1:4063433/1‑67 AGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG > 1:20264937/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGG < 1:35323278/68‑1 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGG < 1:32741215/68‑1 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGG < 1:4777083/68‑1 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:5542562/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:3782343/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:14475338/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:14162862/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:4759063/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:5413947/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:28748051/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:12350682/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:12068652/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:11964646/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:20021296/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:7689977/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:8227662/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:28232804/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:26810746/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:15763039/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:25698939/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:25124436/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:17320788/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:33625272/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:17390897/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:34599496/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:34960149/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:35665495/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:26912310/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTC < 1:30936293/66‑1 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTCCCTGGATGAGTCTGGTCG > 1:14648091/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCGTGTTTGGCTGGATGAGTCTGGTCG > 1:18737837/1‑67 GTCGTACAGCCTAACTTCTGGAGGCTGCTGGCAATTACTGTCTTCTTTGGCTGGATGAGTCTGGTCG > 1:2442201/1‑67 GTCGTACAGCCTAACTTCTGCTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:10947678/1‑67 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:2061384/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:5851811/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:17965487/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:18302084/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:35962257/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:18038329/67‑1 AGACAGTAATTGCCAGCAGCCACCAGAAGTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2269385‑2269311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC > CP009273/2269347‑2269411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |