| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2269311 = | 311 (0.700) | 35 (0.090) | 11/96 | NT | 11.9% | coding (560/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 2269347 = | 250 (0.660) | coding (596/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family | |||||
Only 100 of 472 total aligned reads displayed.
CAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC > CP009273/2269280‑2269411 | cAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCGAGcgtcgt < 1:14637513/68‑1 (MQ=255)cAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcgt > 1:2665597/1‑68 (MQ=255)cAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcgt > 1:24565746/1‑68 (MQ=255)cAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcgt > 1:21452447/1‑68 (MQ=255)cAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcgt < 1:34095303/68‑1 (MQ=255) tgccagcagccaccagaagttaggctgtaCGCGGGTGTTTTTGATTATTTTTCTTTCCAGCGTCGTAc < 1:7118424‑M1/39‑1 (MQ=255) cGCTTTATTGTAGTATGGTCGGGGCTGCCGAAGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACa < 1:13903954/68‑1 (MQ=255) cGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACa < 1:17388281/68‑1 (MQ=255) gCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACa > 1:5275569/1‑67 (MQ=255) gCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAg < 1:28561635/68‑1 (MQ=255) ccagcagccaccagaagttaggctgtaCGACGCGGTTTTTGATTATTTTACTTTCcagcgtcgttca < 1:16090422‑M1/40‑4 (MQ=255) cagcagccaccagaagttaggctgtacgacgctggaaagtaaaataatcaaaaaccgcgtcgTACAGc < 1:13180493‑M2/6‑1 (MQ=255) cagcagccaccagaagttaggctgtacgacgctggaaagtaaaataatcaaaaacagcgtcgTACAGc < 1:17061916‑M2/6‑1 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc < 1:4262430/67‑1 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc < 1:26091263/67‑1 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc < 1:16849570/67‑1 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc < 1:13306857/67‑1 (MQ=255) tttATTGAAGTATGGGCGGGGATGCCGACGCTGTTTTTGATTATTCTACTTTCCAGCGTCGTACAGc < 1:32119291/67‑1 (MQ=255) agccaccagaagttaggctgtacgacgctggaaagtaaaataatcaaaaacagcgtcgTACAGcc < 1:12023282‑M2/7‑1 (MQ=255) aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTa > 1:250020/1‑67 (MQ=255) aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTa > 1:2274057/1‑67 (MQ=255) tGATGTATGGTCGGGGATGCCGACGCTGTTTTTTATTATTTTACTTTCCAGCGTCGTACAGCCTAACt < 1:19265719/68‑1 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt < 1:10750637/68‑1 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:4757811/1‑68 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:505591/1‑68 (MQ=255) tGAAGTATGGGCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt < 1:6813208/68‑1 (MQ=255) gAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACtt < 1:6268228/68‑1 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTTCTTTCCAGCGTCGTACAGCCTAACt > 1:27973938/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:18128398/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:23698363/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:34550846/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:28220689/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:14910320/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCt < 1:15186688/68‑1 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:27651870/1‑67 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:7842891/1‑67 (MQ=255) tCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:6689746/1‑65 (MQ=255) cGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGgctg < 1:14383313/68‑1 (MQ=255) cGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGgct > 1:19961714/1‑67 (MQ=255) gggATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGAGTCGTACAGCCTAACTTCTGGTGgct > 1:7476825/1‑65 (MQ=255) ggctgtaCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGgct < 1:17560578‑M1/58‑1 (MQ=255) ggctgtaCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGgct < 1:5635996‑M1/58‑1 (MQ=255) ggctgtaCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCCAACAGCCTAACTTCTGGTGgct < 1:23413346‑M1/58‑1 (MQ=255) gATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg > 1:31500739/1‑67 (MQ=255) gATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg > 1:24039670/1‑67 (MQ=255) gATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg > 1:16532745/1‑67 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:3683568/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:33491130/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:10341525/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:25575530/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:12341183/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:19489270/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:25783935/67‑1 (MQ=255) tGCCGACGCTGTTTTTGCGTATTTTACTATCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCa < 1:35177460/68‑1 (MQ=255) tGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCa < 1:34896829/68‑1 (MQ=255) tGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCa < 1:32589759/68‑1 (MQ=255) CGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt > 1:30041677‑M1/1‑68 (MQ=255) CGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt > 1:11692644‑M1/1‑68 (MQ=255) CGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACt > 1:6065686‑M1/1‑68 (MQ=255) CGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACt > 1:11413637‑M1/1‑68 (MQ=255) GCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:5744021‑M1/64‑1 (MQ=255) tggaaagtaaaataatcaaaaacagcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGt < 1:21298871‑M2/37‑1 (MQ=255) TGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGt > 1:28962451‑M1/1‑67 (MQ=255) TGTTATTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGt > 1:20953278‑M1/1‑67 (MQ=255) ttttGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCtt < 1:22143727/67‑1 (MQ=255) tttGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTCGCTGCTGGCAATTACTGTCTTGt > 1:11021937/1‑68 (MQ=255) attattTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCATTTACTGTCTTGTTTg > 1:23903387/1‑67 (MQ=255) attattTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTAATGTCTTGTTTg > 1:7261303/1‑67 (MQ=255) ttttACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTgg < 1:23446686/68‑1 (MQ=255) ttttACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTgg < 1:30397041/68‑1 (MQ=255) ttttACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTgg < 1:29886950/68‑1 (MQ=255) taatcaaaaccagcggcgTACAGCCTAACTTCGGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTgg < 1:33050304‑M2/50‑1 (MQ=255) taatcaaaaaccgcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTgg < 1:2937412‑M2/50‑1 (MQ=255) tttACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGa > 1:8303206/1‑68 (MQ=255) aCTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 1:8850502/1‑68 (MQ=255) aCTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 1:8695478/1‑68 (MQ=255) aCTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 1:4544395/1‑68 (MQ=255) aCTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 1:27401908/1‑68 (MQ=255) aCTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 1:33841415/1‑68 (MQ=255) aCTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa < 1:10032343/68‑1 (MQ=255) cTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAg < 1:15654497/68‑1 (MQ=255) cTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAg < 1:36327753/68‑1 (MQ=255) cTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAg < 1:9351884/68‑1 (MQ=255) cTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAg < 1:35506343/68‑1 (MQ=255) tttCCAGCGTCGTATAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAg > 1:33734134/1‑67 (MQ=255) tttCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAg > 1:29079029/1‑67 (MQ=255) tttCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAg > 1:12836617/1‑67 (MQ=255) ccAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTg > 1:4916890/1‑68 (MQ=255) cagcgtcgTACAGCCTAACTTCTGGTTGCTGCTGGCAATTACTGTCTTGTTTTGCTGGATTAGTCTgg < 1:23141520‑M2/60‑1 (MQ=255) agcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTgg > 1:20264937‑M2/8‑67 (MQ=255) agcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTgg > 1:12712031‑M2/8‑67 (MQ=255) agcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTgg > 1:18290615‑M2/8‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTc < 1:30936293‑M2/62‑1 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCgg < 1:391042‑M2/64‑1 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:25124436‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:9624159‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:16012293‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:3782343‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCGTGTTTGGCTGGATGAGTCTGGTCg > 1:18737837‑M2/5‑67 (MQ=255) cgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGc < 1:35962257‑M2/65‑1 (MQ=255) | CAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC > CP009273/2269280‑2269411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |