BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3293574 =	443 (1.000)	22 (0.060)	9/90	NT	6.7%	coding (250/303 nt)	yhbQ	GIY‑YIG nuclease superfamily protein
*	?	CP009273	3293608 =	259 (0.720)	22 (0.060)	9/90	NT	6.7%	coding (284/303 nt)	yhbQ	GIY‑YIG nuclease superfamily protein

Only 100 of 193 total aligned reads displayed.

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3293649‑3293574

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgcaaacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTCA  >  CP009273/3293608‑3293674

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCT                                                                             <  1:10085367/68‑1

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCT                                                                             <  1:19687198/68‑1

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCT                                                                             <  1:34526267/68‑1

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCT                                                                             <  1:26060886/68‑1

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCT                                                                             <  1:11364158/68‑1

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCT                                                                             <  1:29914681/68‑1

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTC                                                                              <  1:34884908/67‑1

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTC                                                                              <  1:6718933/67‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:3815337/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:17573033/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:36265404/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:36235434/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:18910823/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:35289128/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:25148987/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:25956996/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:28650990/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:26305989/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:34459765/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:30057908/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:27232345/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:27827324/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:28380840/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:4469969/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:14228941/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:16877704/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:16278819/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:5201524/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:8877375/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:8086773/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:6752424/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:6005202/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:13644639/68‑1

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCT                                                                             >  1:14328350/1‑67

 TGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGCGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:34707139/68‑1

 TGGTCGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTG                                                                            <  1:9004002/68‑1

    TTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAA                                                                         >  1:14336139/1‑68

     TGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAA                                                                        >  1:36496316/1‑68

     TGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAA                                                                         >  1:20638855/1‑67

     TGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAA                                                                         >  1:23083816/1‑67

     TGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAA                                                                         >  1:18114342/1‑67

     TGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAA                                                                         >  1:24740580/1‑67

      GAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGCCTGCTTAACAGCTCTGCAAAC                                                                       <  1:23846083/68‑1

      GAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       <  1:22220882/68‑1

      GAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       <  1:6878227/68‑1

      GAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       <  1:26862823/68‑1

      GAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       <  1:15181159/68‑1

      GAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGATTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       <  1:28986983/68‑1

        GTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACC                                                                      <  1:24301029/67‑1

        GTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACC                                                                      <  1:23673465/67‑1

        GTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACC                                                                      <  1:7708200/67‑1

        GTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACC                                                                      <  1:11927617/67‑1

        GTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACC                                                                      <  1:36204582/67‑1

        GTATCACGAGCAGTTCAATCGCTTTAAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACC                                                                      <  1:971374/67‑1

         TATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       >  1:3562401/1‑65

         TATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       >  1:8953152/1‑65

         TATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       >  1:10602777/1‑65

         TATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       >  1:11436012/1‑65

         TATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       >  1:18388411/1‑65

         TATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAAC                                                                       >  1:19821327/1‑65

              CGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCCCGGAGA                                                               <  1:12299345/68‑1

              CGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCCCGGAGA                                                               <  1:19482817/68‑1

              CGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTAACCAGCTCTGCAAACCCCGGAGA                                                               <  1:8219176/68‑1

              CGAGCATTTCAATCGCTTTTAATCTCCGGGGTGTGCAGACTGCTTAACAGCTCTGCAAACCCCGGAGA                                                               <  1:10981571/68‑1

               GAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCCCGGAGAT                                                              <  1:13824546/68‑1

                       CAATCGCTTTTACTCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCCCGGAGATTAAAAGCG                                                      <  1:8671673/68‑1

                       CAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCCCGGAGATTAAAAGCG                                                      <  1:1408562/68‑1

                         ATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCCCGGAGATTAAAAGCGAT                                                    <  1:29959722/68‑1

                               TTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAT                                              <  1:16945678/68‑1

                                     CTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGT                                        <  1:32902044/68‑1

                                              TTGCAGCCGGCTTAACACCGCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCA                                <  1:27018454/67‑1

                                                                  CTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCAT             <  1:34564759/66‑1

                                                                   TGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCA          <  1:26577869/68‑1

                                                                    GCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCA          >  1:7147994/1‑67

                                                                      AAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCG       <  1:18438300/68‑1

                                                                      AAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCG       <  1:5606996/68‑1

                                                                      AAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGC        >  1:16597614/1‑67

                                                                      AAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGC        <  1:34026816/67‑1

                                                                       AACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCGGGCCGGTAACGCCATTCAGCGC      >  1:34272594/1‑68

                                                                       AACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGC      >  1:11079010/1‑68

                                                                       AACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGC      >  1:31496518/1‑68

                                                                       AACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGC      >  1:12429251/1‑68

                                                                       AACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGC      >  1:5675800/1‑68

                                                                       AACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGC      >  1:18923504/1‑68

                                                                       AACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGC      >  1:7297587/1‑68

                                                                       AACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGC      >  1:12851849/1‑68

                                                                       AACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGC      >  1:11747397/1‑68

                                                                       AACCCCGGAGATTAAAAGCGATTCAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGC      >  1:35368963/1‑68

                                                                         CCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGT    <  1:2223/68‑1

                                                                         CCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGT    <  1:7260834/68‑1

                                                                         CCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGT    <  1:2147681/68‑1

                                                                         CCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCG     >  1:15496452/1‑67

                                                                         CCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCG     >  1:32788497/1‑67

                                                                         CCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCG     >  1:31673646/1‑67

                                                                         CCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCG     >  1:4330737/1‑67

                                                                         CCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCG     >  1:20144501/1‑67

                                                                         CCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCG     >  1:28740901/1‑67

                                                                          CCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTC   <  1:24153689/68‑1

                                                                           CCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTCA  >  1:13011532/1‑68

                                                                           CCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTCA  >  1:7870754/1‑68

CTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAATCTCCGGGGTTTGCAGACTGCTTAACAGCTCTGCAAACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3293649‑3293574

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctgcaaacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTCA  >  CP009273/3293608‑3293674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.