| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3293574 = | 443 (1.000) | 22 (0.060) | 9/90 | NT | 6.7% | coding (250/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein |
| ? | CP009273 | 3293608 = | 259 (0.720) | coding (284/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein | |||||
Only 100 of 633 total aligned reads displayed.
CGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTCA > CP009273/3293541‑3293674 | cGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcccc > 1:7478540/1‑68 (MQ=255) aaaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGga < 1:4487425/67‑1 (MQ=255) cgagcatttcaatcgcttttaatctccggggtttgcagactgcttaacagctctgcaaacccCGgaga < 1:12465319‑M2/6‑1 (MQ=255) cgagcatttcaatcgcttttaatctccggggtttgcagactgcttaacagctctgcaaacccCGgaga < 1:27350154‑M2/6‑1 (MQ=255) aacagagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:31301455/65‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:18686758/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:7003095/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:4323951/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:12300455/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:22268478/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:31484977/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:29740564/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:7253322/68‑1 (MQ=255) aaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGAtt > 1:34220559/1‑68 (MQ=255) aaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGAtt > 1:27306784/1‑68 (MQ=255) gagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTaa > 1:6006550/1‑68 (MQ=255) caatcgcttttaatctccggggtttgcagactgcttaacagctctgcaaacccCGGAGATTAAAAGCg < 1:26037256‑M2/15‑1 (MQ=255) cTGGTATCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:34419018/67‑1 (MQ=255) cTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:6562344/67‑1 (MQ=255) cTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:17208301/67‑1 (MQ=255) tGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGAt > 1:9592873/1‑68 (MQ=255) gTAGCGGAAGGCGCCGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTg > 1:24570955/1‑68 (MQ=255) cgcttttaatctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTg < 1:562651‑M1/53‑1 (MQ=255) tatcGGTAGGCGCAGTGTTTTCATTGCTGTTAAGCAGTCTGGAAACCCCGGAGATTAAAATCGATTg < 1:19013712/64‑1 (MQ=255) tAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTg < 1:27689168/67‑1 (MQ=255) aGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGaa > 1:23023529/1‑68 (MQ=255) aGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGa < 1:22094739/67‑1 (MQ=255) gCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGaaa > 1:11994452/1‑68 (MQ=255) ggAAGGCGCAGGGTTTGCAGATCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt < 1:30783037/67‑1 (MQ=255) gAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt > 1:9332208/1‑66 (MQ=255) aaatctccgggggttgcagactgcataacagctctgcaaacccCGGAGATTAAAAGCGATTGAAATGc < 1:19667240‑M2/25‑1 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:25753374/67‑1 (MQ=255) aGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTc < 1:33177772/68‑1 (MQ=255) aGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTc < 1:29204444/68‑1 (MQ=255) tctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCACACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:10981571‑M1/62‑1 (MQ=255) gcgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt > 1:35504033/1‑68 (MQ=255) gcgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt > 1:15365728/1‑68 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:5320146/66‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:28396072/66‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:25262666/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:17613229/67‑1 (MQ=255) GGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATAc < 1:16903692‑M1/67‑1 (MQ=255) GTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATa > 1:11436012‑M1/1‑65 (MQ=255) GTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATa > 1:18388411‑M1/1‑65 (MQ=255) TTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCa > 1:8240002‑M1/1‑67 (MQ=255) TTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCa > 1:29971743‑M1/1‑67 (MQ=255) TTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCa > 1:32751793‑M1/1‑67 (MQ=255) TTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCa > 1:19912446‑M1/1‑67 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCGACCa < 1:9004002‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:14228941‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:35289128‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:27009207‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:6752424‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:1803759‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:16278819‑M1/68‑1 (MQ=255) AGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAg < 1:26472985‑M1/68‑1 (MQ=255) AGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAg < 1:11364158‑M1/68‑1 (MQ=255) gCTGTTAAGCAGTCTGCAAACCCCGTAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAgg < 1:7683497/66‑1 (MQ=255) gCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGcc > 1:20886990/1‑68 (MQ=255) aagaagTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:5011791/68‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:11734803/68‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:28591805/68‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATAGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:8659093/68‑1 (MQ=255) aaGCAGGCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:33814927/68‑1 (MQ=255) aGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGGTCGTGATACTCAACCAGGCCGGTAAc > 1:36586389/1‑67 (MQ=255) aGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCACCCAGGCCGGTAAc > 1:32491812/1‑67 (MQ=255) aGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCACCCAGGCCGGTAAc > 1:22692822/1‑67 (MQ=255) aGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc > 1:13848611/1‑67 (MQ=255) aGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc > 1:21501787/1‑67 (MQ=255) aGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc > 1:24886239/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:36906918/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:36384910/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:35832765/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:10059299/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:16767108/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:23619374/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:28003596/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:28941803/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:13625606/1‑67 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAATCGATTGAAAAGCTCGTGATACTAAACCAGTCCGGTAACGACa > 1:15703256/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGc < 1:13402981/66‑1 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:8817998/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:3014809/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:20303567/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:19407670/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:14363899/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:14861001/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:34862339/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:25921479/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:10485572/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:23968185/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCCTGATACTCAACCAGGCCGGTAACGCCa > 1:3190152/1‑68 (MQ=255) aacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAgcgc > 1:26742521‑M2/6‑68 (MQ=255) aacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAgcgc > 1:8005496‑M2/6‑68 (MQ=255) aacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAgcgc > 1:7297587‑M2/6‑68 (MQ=255) aacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAgcgc > 1:11079010‑M2/6‑68 (MQ=255) aacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAgcgc > 1:34598311‑M2/6‑68 (MQ=255) cccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGcgcg > 1:31673646‑M2/4‑67 (MQ=255) cccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGcgcg > 1:36207423‑M2/4‑67 (MQ=255) cCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTCa > 1:12967418‑M2/2‑68 (MQ=255) | CGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTCA > CP009273/3293541‑3293674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |