| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3630213 | 305 (0.690) | 63 (0.190) | 26/84 | NT | 21.7% | coding (558/1203 nt) | yhiN | putative oxidoreductase |
| ? | CP009273 | = 3630199 | 225 (0.670) | coding (572/1203 nt) | yhiN | putative oxidoreductase | |||||
Only 100 of 421 total aligned reads displayed.
GCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGCA > CP009273/3630148‑3630280 | gccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCg > 1:58638/1‑67 (MQ=255) cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGgca > 1:21818140/1‑68 (MQ=255) gCACCTGTAACTCTTCGTGCAACGGTTTATGCACAGTGAAAGGCACCAGCCCCGCGCGGGTCGgcagc > 1:13390505/1‑68 (MQ=255) gCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGgcagc > 1:22346134/1‑68 (MQ=255) gCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGGCGgcag > 1:36173187/1‑67 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTTAATGGCACCAGACCCGCGCGGGTCtggtgc < 1:2766903‑M1/66‑7 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:2309511/1‑68 (MQ=255) aCCTGAAACTCTTCGAGCACCGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:12775939‑M1/68‑9 (MQ=255) tAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGa > 1:20426260/1‑68 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:32889050/1‑68 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccagtcactc > 1:13281797‑M1/1‑53 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:10648670/1‑67 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:13204887/1‑67 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:26039093/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactct < 1:14871668‑M1/68‑17 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:10975049/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:6339950/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGGCtggtgccattcac > 1:13963564‑M1/1‑52 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:24387995/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:20246298/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:28368259/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:7349069/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:4596658/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGCCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:7780547/1‑68 (MQ=255) tctACGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctg < 1:1442457‑M1/68‑18 (MQ=255) ctTCGCGCAACGGTTTATGCAGAGTGAACGGCACCAGACCCGCGCGGGTCtggtgccattcactctgc < 1:21369277‑M1/68‑19 (MQ=255) ctTCGACCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgc < 1:5543031‑M1/68‑19 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:31843043/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCCGACCCGCGGGGGTGtggtggccttcactctggataa > 1:29463846‑M1/1‑45 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:33448633/1‑68 (MQ=255) cAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:34338188/1‑67 (MQ=255) tATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATc < 1:14183748/68‑1 (MQ=255) aTGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:33986356/68‑1 (MQ=255) aTGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt > 1:25190866/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTGtgggggcattccctctgcataaaccgttgctggaa > 1:21983266‑M1/1‑33 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:22456216/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcgctctgcataaaccgttgctcgaa > 1:8776408‑M1/1‑32 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCATCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:12881971/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:19856002/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:27082651/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:17076922/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:12419280/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:3773814/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:19231353/1‑68 (MQ=255) cAGAGTGAATGGCCCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:23870428/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcattaaccgttgctcgaaga > 1:30617802‑M1/1‑31 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:4352353/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:34071579/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:25427535/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:8148233/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:10025788/1‑68 (MQ=255) agagTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaaga < 1:23760089‑M1/67‑38 (MQ=255) agTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATaa > 1:19340047/1‑67 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagtt > 1:2567681‑M1/1‑27 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:17305027/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:7582403/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:26327720/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATCGTTCGGCAATCTTATAAcc > 1:1663551/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGCTCtggtgccattcactctgcataaaccgttgctcgaagag < 1:29643161‑M1/65‑39 (MQ=255) gTGAATGGAACCAGACCCGAGCGGGTCGGCAGAACGTTGAGGCCAAATAGTTCGGCAATATTATAAcc > 1:888724/1‑68 (MQ=255) gAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCaa > 1:6710434/1‑68 (MQ=255) gAATCGCACCAGCCCCCCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagt < 1:28662424‑M1/64‑40 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:36511439/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:10345287/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:18264492/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGCGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:30457692/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:30862667/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:17687163/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:29139/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:3245722/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:35063309/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:17809263/1‑68 (MQ=255) gCACCAGACCCGCGCGGGGCGGCAGCACGTTGAGGCCTAATTGTTCGGCAATCTTATCAAGAAACGGc > 1:34618127/1‑68 (MQ=255) cACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt < 1:1543909‑M1/65‑47 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattgactctgcataaaccgttgctcgaagagttacaggtgctg > 1:35861324‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:16166103/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:11763444/1‑67 (MQ=255) ccAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCgcc > 1:12249899/1‑66 (MQ=255) ccAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAc > 1:26869019/1‑68 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:35252570/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:18933197/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACAAAACGGCGAcgcg > 1:11335235/1‑67 (MQ=255) cccGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggc < 1:29950531‑M1/68‑57 (MQ=255) cccGCGCGGGTCGGCAGCCCGTTGAGGCCAAATTGTTCGGCAATCTAATACCCAAACGGCGACgcgc > 1:17478383/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:11631009/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTGATAACCAAACGGCGACgcgc > 1:18563963/1‑67 (MQ=255) gcgcgGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtg < 1:13640139‑M1/68‑60 (MQ=255) cgcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAg > 1:31139849/1‑67 (MQ=255) gcgGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggc > 1:36626181‑M1/1‑7 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:2083730/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc < 1:36380703/67‑1 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:32139270/1‑67 (MQ=255) tCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtg < 1:948234‑M1/67‑66 (MQ=255) tCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtg < 1:5107738‑M1/67‑66 (MQ=255) tCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtg > 1:33288920‑M1/1‑2 (MQ=255) tCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtg > 1:31427242‑M1/1‑2 (MQ=255) tCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCgg < 1:27903150/67‑1 (MQ=255) tCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCgg < 1:10159849/67‑1 (MQ=255) ctggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtgcc < 1:6906958‑M1/68‑68 (MQ=255) ctggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtgc < 1:35522366‑M1/67‑67 (MQ=255) | GCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGCA > CP009273/3630148‑3630280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |