| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3630213 | 305 (0.690) | 63 (0.190) | 26/84 | NT | 21.7% | coding (558/1203 nt) | yhiN | putative oxidoreductase |
| ? | CP009273 | = 3630199 | 225 (0.670) | coding (572/1203 nt) | yhiN | putative oxidoreductase | |||||
Only 100 of 479 total aligned reads displayed.
AGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGC > CP009273/3630132‑3630266 | aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCCCCa > 1:35199895/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:23147978/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:6056968/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:5858241/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:15667955/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:27027547/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:13736483/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAAGGCACCa > 1:5552291/1‑68 (MQ=255) cACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAga < 1:5107738‑M2/67‑3 (MQ=255) cACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAga > 1:36365740‑M2/1‑65 (MQ=255) cACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGA < 1:16085996‑M1/67‑1 (MQ=255) ccGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCCGACCC > 1:12279394‑M1/1‑68 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGCGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgc < 1:27460220‑M2/68‑8 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgc < 1:9635733‑M2/68‑8 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGC < 1:20911311‑M1/68‑1 (MQ=255) cACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgc < 1:11025536‑M2/68‑10 (MQ=255) cACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcg > 1:33926267‑M2/1‑59 (MQ=255) gcccgccAGCACCTGTACCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcggg < 1:6780380‑M2/68‑13 (MQ=255) gcccgccAGCACCTGTAACTCTTCGCGCAACGGTTTATGCAGAGTGAATGGCCCCAGACCCGCGCGGG > 1:31619746‑M1/1‑68 (MQ=255) gcccgccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGG < 1:22787763‑M1/68‑1 (MQ=255) cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGgca > 1:21818140/1‑68 (MQ=255) gCACCTGTAACTCTTCGTGCAACGGTTTATGCACAGTGAAAGGCACCAGCCCCGCGCGGGTCGgcagc > 1:13390505/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCACCGGATTATGCACAGTGAATGGCACCAgacccgcgcgggtctggtgcca > 1:34156828‑M2/1‑46 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgcca > 1:13594780‑M2/1‑46 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:26674743/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:24574870/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:10289072/1‑68 (MQ=255) cccgtaaCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccat < 1:31372813‑M1/65‑10 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:34921304/1‑68 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:28842937/1‑68 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCCCCCGACCCGCGCGGGTCtggtgccattcgc > 1:4374347‑M1/1‑53 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtgtggtggcattgac < 1:13237296‑M2/66‑28 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:10648670/1‑67 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:13204887/1‑67 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:17355172/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccgttgactcg < 1:15215427‑M2/68‑31 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:17981660/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:33104818/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:3061242/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:30268905/1‑67 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctg < 1:26878177‑M1/68‑18 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:2938611/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:23459399/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:4596658/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:2607178/1‑68 (MQ=255) ctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgc > 1:31813454‑M2/1‑36 (MQ=255) ctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGGCtggtgccattcactctgc < 1:6676290‑M1/68‑19 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCCCCAGACCCCCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:36792501/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccattccctctgcataa < 1:19248614‑M2/67‑37 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:23889425/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:33448633/1‑68 (MQ=255) gCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:29613848/1‑68 (MQ=255) ggTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggggccattgacgctgcattaagcgtt < 1:8025636‑M2/67‑43 (MQ=255) aTGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:35411562/68‑1 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:25353117/1‑68 (MQ=255) gCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccgttcactctgcataaaccgttgcgcgaag < 1:21369277‑M2/68‑51 (MQ=255) gCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaag < 1:7633254‑M2/68‑51 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcgctctgcataaaccgttgctcgaa > 1:8776408‑M1/1‑32 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:12918086/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:32099713/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:32497240/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:12831078/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:3773814/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:2819356/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:14752727/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:6550081/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:7455656/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:8148233/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:10025788/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:1690516/1‑68 (MQ=255) agTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATaa > 1:16310698/1‑67 (MQ=255) gTGAATGGCACCAgacccgcgcgggtctggtgccattcgctctgcataaaccgttgcgcgcagagtt < 1:28547513‑M2/67‑55 (MQ=255) gTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaagagtt < 1:14045992‑M2/67‑55 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:2212430/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:17241509/1‑68 (MQ=255) gTGAATGGAACCAGACCCGAGCGGGTCGGCAGAACGTTGAGGCCAAATAGTTCGGCAATATTATAAcc > 1:888724/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:18264492/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:20262036/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:10345287/1‑68 (MQ=255) ggCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:14379689/1‑67 (MQ=255) gCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaagagttacaggt < 1:15124975‑M2/66‑61 (MQ=255) gCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaagagttacaggt < 1:36509740‑M2/66‑61 (MQ=255) gCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:12668605‑M1/1‑20 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:2573343/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:19952365/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:17687163/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:22410809/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:36056362/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:30862667/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:18920275/1‑68 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattgactctgcataaaccgttgctcgaagagttacaggtgctg > 1:35861324‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattccctctgcataaaccgttgctcgaagagttacaggtgctg > 1:25560359‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctg > 1:2377344‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCACACGGCg > 1:1146228/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:11763444/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:27871890/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:21972530/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:29805717/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:3461722/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:19792233/1‑67 (MQ=255) | AGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGC > CP009273/3630132‑3630266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |