| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3641246 | 567 (1.270) | 24 (0.100) | 16/62 | NT | 8.0% | intergenic (‑98/‑177) | dinQ/agrA | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/Inactive antisense sRNA |
| ? | CP009273 | 3641677 = | 236 (0.960) | noncoding (24/84 nt) | agrB | Antisense sRNA antitoxin for the DinQ toxin | |||||
Only 100 of 932 total aligned reads displayed.
CATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGCGCA > CP009273/3641179‑3641312 | cATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCC > 1:13452330‑M1/1‑68 (MQ=255)cATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCACTGTTAGATAAGAACTCTCTCACTCC > 1:22331549‑M1/1‑68 (MQ=255) tCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCgg < 1:18655000/68‑1 (MQ=255) tCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCg > 1:27959364/1‑67 (MQ=255) gCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCa > 1:17363505/1‑68 (MQ=255) gCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCAcgcca > 1:26848293‑M1/1‑63 (MQ=255) ttACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCaga < 1:11269628/68‑1 (MQ=255) ttACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCaga < 1:26487514/68‑1 (MQ=255) aCTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGc < 1:31756145/68‑1 (MQ=255) aCTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGc < 1:13030036/68‑1 (MQ=255) cTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCa < 1:15027522/68‑1 (MQ=255) tCATCCACTGCCTGTCTCTGAGAATTTCTCATTGTTAGATAAGAACTCTCTCACTCCagccagagcca < 1:22922057‑M1/68‑12 (MQ=255) tCATCCACTGCCTGTCACGTCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCag < 1:14043304‑M1/59‑3 (MQ=255) cATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCagccagag > 1:13661286‑M1/1‑56 (MQ=255) aTCCACTGCCTGTCACTGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCa < 1:4521667/68‑1 (MQ=255) tCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAg < 1:12223450/68‑1 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt < 1:10424533/68‑1 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt < 1:36117837/68‑1 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt < 1:8236922/68‑1 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt < 1:6904238/68‑1 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt > 1:28908496/1‑68 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt < 1:3341387/68‑1 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt < 1:14264087/68‑1 (MQ=255) aCTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCagccagagccacccact > 1:35037026‑M1/1‑51 (MQ=255) aCTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTa > 1:29554279/1‑68 (MQ=255) aCTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTa > 1:5204076/1‑68 (MQ=255) aCTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTa > 1:8076942/1‑68 (MQ=255) aCTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTa < 1:29844541/68‑1 (MQ=255) aCTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTACGGCCAGAGCATCAGTTa > 1:19721097/1‑68 (MQ=255) tGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAAc > 1:32114364/1‑68 (MQ=255) tGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAAc > 1:10777612/1‑68 (MQ=255) tGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAAc > 1:15304642/1‑68 (MQ=255) gCCTGTCACGGCGCATGTCTCATTGCTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACg < 1:21898901/68‑1 (MQ=255) ccTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCcgccagagccaccaaatcagg > 1:18294081‑M1/1‑47 (MQ=255) ccTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACg > 1:16432890/1‑67 (MQ=255) tGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGca < 1:885787/68‑1 (MQ=255) cACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGcacca < 1:21344518/68‑1 (MQ=255) cACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGcacca < 1:19952260/68‑1 (MQ=255) aCGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGcaccac < 1:2613902/68‑1 (MQ=255) aCGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGcacca > 1:20697421/1‑67 (MQ=255) aCGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGcacca > 1:35426153/1‑67 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:9793878/68‑1 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:25142359/68‑1 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:36322305/68‑1 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:370904/68‑1 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:18188192/68‑1 (MQ=255) cgcATGTCTCATTGTTAGATAAGAACTCTCTCACTCCag < 1:29302884‑M1/39‑3 (MQ=255) cgcATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGt > 1:34688140/1‑68 (MQ=255) aTGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACt < 1:3963753/68‑1 (MQ=255) tcATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTgt < 1:24455622/68‑2 (MQ=255) tcATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGa < 1:19011064/68‑1 (MQ=255) tGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAg > 1:748188/1‑68 (MQ=255) tGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAg > 1:1006399/1‑68 (MQ=255) gTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAgg < 1:5971055/68‑1 (MQ=255) gTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAgg < 1:6246799/68‑1 (MQ=255) gTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAgg < 1:12502962/68‑1 (MQ=255) tAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGa < 1:3106259/67‑1 (MQ=255) tAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGa < 1:17772643/67‑1 (MQ=255) aGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACt > 1:26007047/1‑68 (MQ=255) aGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACt < 1:1466237/68‑1 (MQ=255) gATAAGAACTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaag > 1:15567768‑M1/1‑20 (MQ=255) aTAAGAACTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaag > 1:19245731‑M1/1‑19 (MQ=255) aTAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACttt > 1:34092340/1‑68 (MQ=255) aTAAGAAATCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCCCCCGTACTTCTGACCAGGACttt > 1:8556413/1‑68 (MQ=255) aaGAACTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcg > 1:31468148‑M1/1‑17 (MQ=255) aaGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGa > 1:3234561/1‑68 (MQ=255) aCTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggttt > 1:12836349‑M1/1‑13 (MQ=255) aCTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggttt > 1:5621174‑M1/1‑13 (MQ=255) aCTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggttt > 1:23116308‑M1/1‑13 (MQ=255) aCTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCCCCAACCGTAATTATGACCCGCACTTTGAAAGc > 1:15917468/1‑68 (MQ=37) aCTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGc > 1:27334713/1‑68 (MQ=255) aCTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGc < 1:25613831/68‑1 (MQ=255) ctgtcACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGtt < 1:6588864/65‑1 (MQ=255) ctctcACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttt < 1:24174460‑M1/68‑59 (MQ=255) ctcACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggttttttt > 1:28464768‑M1/1‑8 (MQ=255) ctcACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTa > 1:28721019/1‑68 (MQ=255) ctcACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTa > 1:3436167/1‑68 (MQ=255) aCTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgc > 1:30184865/1‑68 (MQ=255) cTCCaggcagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgtc < 1:4895786‑M1/68‑65 (MQ=255) cTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgtc < 1:776036‑M1/68‑65 (MQ=255) cTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgtc < 1:33756241‑M1/68‑65 (MQ=255) cTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgtc < 1:7177093‑M1/68‑65 (MQ=255) cTCCagacagagccaccaactcagggctggaaagtaaaaaaccgacgcgaagtcggtttttttacgtc < 1:22582606‑M1/68‑65 (MQ=255) cTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcg < 1:11675013/68‑1 (MQ=255) cTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcg < 1:23434124/68‑1 (MQ=255) cTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcg < 1:30499329/68‑1 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:20977870‑M1/1‑3 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:30786710‑M1/1‑3 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:10972178‑M1/1‑3 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:23778073‑M1/1‑3 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:24753418‑M1/1‑3 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:9312590/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:16815254/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:9054816/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:36767272/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:35767817/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:25412042/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:1196089/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:32845613/1‑68 (MQ=255) ccagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:20370671‑M1/1‑2 (MQ=255) | CATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGCGCA > CP009273/3641179‑3641312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |