| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3641246 | 567 (1.270) | 24 (0.100) | 16/62 | NT | 8.0% | intergenic (‑98/‑177) | dinQ/agrA | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/Inactive antisense sRNA |
| ? | CP009273 | 3641677 = | 236 (0.960) | noncoding (24/84 nt) | agrB | Antisense sRNA antitoxin for the DinQ toxin | |||||
Only 100 of 549 total aligned reads displayed.
TAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCT > CP009273/3641612‑3641742 | tAATTCTTGCAATTTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTccagc < 1:30439300/68‑1 (MQ=255)tAATTCTTGCAATGTTATCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTccag < 1:13484422/67‑1 (MQ=255)tAATTCTTGCAATGTTATCAACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTccag < 1:10922955/67‑1 (MQ=255)tAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTccag < 1:33150175/67‑1 (MQ=255) tCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCaga > 1:27202601/1‑68 (MQ=255) tcatccactgcctgtctcttagaatttctcattgttagataagaactctctcactccAGCCAGAGcca < 1:30611950‑M2/11‑1 (MQ=255) tGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGccacca > 1:8430468/1‑67 (MQ=255) tGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGccacca > 1:6299625/1‑67 (MQ=255) cctgtcacggcgcatgtctcattgttagataagaactctctcactccCGCCAGAGCCACCAAATCAgg > 1:18294081‑M2/48‑68 (MQ=255) ccACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:28332559/1‑68 (MQ=255) ccACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:14006830/1‑68 (MQ=255) ccACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:17678388/1‑68 (MQ=255) ccACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:22191239/1‑68 (MQ=255) ccACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:17468199/1‑68 (MQ=255) ccACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:6101256/1‑68 (MQ=255) ccACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:492535/1‑68 (MQ=255) cACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg < 1:6647175/67‑1 (MQ=255) cACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg < 1:30050004/67‑1 (MQ=255) agatGGGTAATAGGATTGATCCGTTAGATCATTCCTCTCTCACTCCAGCCAGAGCCACCAACTCAgg < 1:13636927/64‑1 (MQ=2) aCTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCACCTCAgg > 1:23587787/1‑66 (MQ=255) aCTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:9371127/1‑66 (MQ=255) aCTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:7690093/1‑66 (MQ=255) aCTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:14533279/1‑66 (MQ=255) aCTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:17882845/1‑66 (MQ=255) aCTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAgg > 1:33871409/1‑66 (MQ=255) ggcgaatgtctcattgttagataagaactctctcactccAGCCAGAGCCACCAACTCAGGGCTGGaaa < 1:8786851‑M2/29‑1 (MQ=255) cgcatgtctcattgttagataagaactctctcactccCGCCAGAGCAACAAACACAGGCCTCGAAAGt > 1:26761959‑M2/38‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTGTCTCACTCCAGCCAGAGCCGCCAACTCAGGGCTGGAAAGTaa > 1:34260608/1‑68 (MQ=25) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:16991704/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:24403918/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:10106119/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:11878070/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:28066102/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:13015679/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:2933049/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:1475926/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:5680466/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:36817343/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:21203463/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:20884806/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:19940940/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:31640136/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaa > 1:31908879/1‑68 (MQ=255) aGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACGCAGGGCTGGAAAGTaa > 1:34490471/1‑68 (MQ=255) tATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaa > 1:26927885/1‑68 (MQ=255) tATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaa > 1:1064886/1‑68 (MQ=255) aTTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAGAGTaaaaa > 1:34626736/1‑68 (MQ=255) aTTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaa > 1:7943810/1‑68 (MQ=255) aTTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaa > 1:15301292/1‑68 (MQ=255) tGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaacc > 1:1516731/1‑66 (MQ=255) tGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaaa > 1:25586996/1‑67 (MQ=255) tGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaaa > 1:26222578/1‑67 (MQ=255) tGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaaa > 1:3992681/1‑67 (MQ=255) tGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaaa > 1:7263453/1‑67 (MQ=255) tGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaaa > 1:23276097/1‑67 (MQ=255) tGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaaa > 1:35252359/1‑67 (MQ=255) tGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTaaaaaa > 1:28870412/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:21494404/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:29258428/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:20482597/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:5416334/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:19607580/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:16275857/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:21876167/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:35455978/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:2400453/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:16598187/1‑67 (MQ=255) gCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCg > 1:25274541/1‑67 (MQ=255) tgttagataagaactctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGAc > 1:36670943‑M2/26‑67 (MQ=255) gataagaactctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAg > 1:15567768‑M2/21‑68 (MQ=255) gataagaactctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAg > 1:36282868‑M2/21‑68 (MQ=255) ataagaactctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAg > 1:19245731‑M2/20‑67 (MQ=255) aagaactctctcactccGGCCAGAGCCACCAACTCAggg > 1:27435857‑M2/18‑39 (MQ=255) aagaactctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCg > 1:29918968‑M2/18‑68 (MQ=255) aagaactctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCg > 1:11501631‑M2/18‑68 (MQ=255) aagaactctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCg > 1:24997821‑M2/18‑68 (MQ=255) actctctcactccAGCCCGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt > 1:2292375‑M2/14‑68 (MQ=255) actctctcactccAGCCAGAGCCCCCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt > 1:11167164‑M2/14‑68 (MQ=255) actctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGCCGCAAAGTCGGttt > 1:3228519‑M2/14‑68 (MQ=255) actctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt > 1:33724049‑M2/14‑68 (MQ=255) actctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt > 1:24643908‑M2/14‑68 (MQ=255) actctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt > 1:12836349‑M2/14‑68 (MQ=255) actctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt > 1:3093511‑M2/14‑68 (MQ=255) ctctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttt > 1:14196113‑M2/13‑68 (MQ=255) ctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 1:35834964‑M2/58‑1 (MQ=255) ctctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 1:24174460‑M2/58‑1 (MQ=255) ctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttt > 1:18628200‑M2/9‑67 (MQ=255) ctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttt > 1:12413202‑M2/9‑67 (MQ=255) ctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttt > 1:373172‑M2/9‑67 (MQ=255) ctcactccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttt > 1:18136877‑M2/9‑67 (MQ=255) actccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACg > 1:26525454‑M2/6‑67 (MQ=255) actccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTGTTTTTACg > 1:24767161‑M2/6‑67 (MQ=255) ctccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGTc < 1:31227391‑M2/64‑1 (MQ=255) ctccAGACAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCGAAGTCGGTTTTTTTACGTc < 1:22582606‑M2/64‑1 (MQ=255) tccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGTcc > 1:15871466‑M2/4‑68 (MQ=255) tccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTCCGTcc > 1:28666623‑M2/4‑68 (MQ=255) tccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGt > 1:7540408‑M2/4‑66 (MQ=255) tccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGt > 1:18993284‑M2/4‑66 (MQ=255) tccAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGt > 1:33416844‑M2/4‑66 (MQ=255) ccAGCCAGAGCCACCCACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCt < 1:4358797‑M2/66‑1 (MQ=255) | TAATTCTTGCAATGTTAGCCACTGGCTAATAGTATTGAGCTGTTAGATAAGAACTCTCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCT > CP009273/3641612‑3641742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |