| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4375165 = | 508 (1.140) | 18 (0.050) | 9/90 | NT | 5.0% | intergenic (+7/‑45) | yjeM/yjeN | putative transporter/uncharacterized protein |
| ? | CP009273 | 4375192 = | 274 (0.770) | intergenic (+34/‑18) | yjeM/yjeN | putative transporter/uncharacterized protein | |||||
Only 100 of 701 total aligned reads displayed.
GCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCC > CP009273/4375099‑4375232 | cctgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGc > 1:12101472‑M1/67‑68 (MQ=255) ctgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGcc > 1:3438650‑M1/66‑68 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:22150827/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:20824488/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:33925098/67‑1 (MQ=255) tgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGccc > 1:14966482‑M1/65‑68 (MQ=255) tgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGccc > 1:29261863‑M1/65‑68 (MQ=255) gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAATTCCGCAGTGGGCGGTGGAATAACCCGATGccc < 1:16566843/68‑1 (MQ=255) gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGccc < 1:18441064/68‑1 (MQ=255) gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGcc < 1:15162592/67‑1 (MQ=255) gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGcc < 1:29881972/67‑1 (MQ=255) tttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCt < 1:20670182/67‑1 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTAt > 1:2487977‑M1/62‑68 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTAt > 1:2116496‑M1/62‑68 (MQ=255) ttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTAt < 1:16290556/68‑1 (MQ=255) ttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTAt < 1:26540566/68‑1 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc < 1:2051065‑M1/8‑1 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc > 1:25226837‑M1/61‑68 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc < 1:28413371‑M1/8‑1 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc < 1:27410092‑M1/8‑1 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc > 1:8116615‑M1/61‑68 (MQ=255) tACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATc < 1:23820024/68‑1 (MQ=255) tACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATc < 1:10736655/68‑1 (MQ=255) aGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCt > 1:20299643/1‑68 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCt < 1:24145117/65‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTa > 1:28661297/1‑66 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:1182482/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:23465844/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:14339164/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:10484987/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGGCTAcc < 1:35054037/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCAATGCCCTATCGTCTAcc < 1:14791921/68‑1 (MQ=255) cTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTa > 1:15931791/1‑65 (MQ=255) tATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTg < 1:12568546/68‑1 (MQ=255) ttGCACCAGAGTGGCAAAAAATCCGCAGTGGCCGGTGGAATAACCCGATGCCCTATCGCCTACCTGAc < 1:23187929/68‑1 (MQ=255) tGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACg > 1:6854158/1‑68 (MQ=255) tGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACg < 1:34518086/68‑1 (MQ=255) gcagcaGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGa > 1:31637312/1‑68 (MQ=255) agcagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATGACCCGATGCCCTATCGTCTACCTGACGATa > 1:17373558/1‑68 (MQ=255) agcagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATa > 1:8666200/1‑68 (MQ=255) agcagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATa > 1:19260418/1‑68 (MQ=255) agcagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATa > 1:18004153/1‑68 (MQ=255) agagTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg > 1:30919285/1‑67 (MQ=255) agagTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg > 1:36821938/1‑67 (MQ=255) agagTGGCAAAAAATCCGAAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg > 1:25463066/1‑67 (MQ=255) agTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg > 1:100267/1‑68 (MQ=255) agTGGCAAAAAAACCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg > 1:33385600/1‑68 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAggg < 1:32891744/65‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAggg < 1:28998937/65‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGc < 1:2798682/66‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:9328360/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:2458542/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:9751509/67‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAg > 1:8490487/1‑67 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:10293665/68‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:22601001/68‑1 (MQ=255) aaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACa > 1:31903983/1‑68 (MQ=255) aaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAg < 1:10957234/68‑1 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa < 1:27736991/68‑1 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa < 1:12409375/68‑1 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa < 1:20025987/68‑1 (MQ=255) ccGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGaaa > 1:7774668/1‑68 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:552476/68‑1 (MQ=255) gCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATg < 1:744595/68‑1 (MQ=255) catccataacatttcctgtctttacGCCCTATCGTCTACCTGCCGATAGGGCGTAAAGACAGGAAATg < 1:3565191‑M1/43‑1 (MQ=255) cAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt > 1:36500504/1‑68 (MQ=255) aGTGGGCGGTGGATTAACCCGATGCCCTATGGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:21824544/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:13267110/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:30645922/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:2235873/67‑1 (MQ=255) gggCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTAt < 1:27590439/67‑1 (MQ=255) gcggcgGAATAACCCGTTGCCCTATCGTCTACCAGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:17042390/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:36021764/67‑1 (MQ=255) cGGTGGAATAACCCGATGGCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGa < 1:588727/67‑1 (MQ=255) cGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGa < 1:6125563/67‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac < 1:11344013/67‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac < 1:14101507/67‑1 (MQ=255) gAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGaca > 1:21620868/1‑67 (MQ=255) aTAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACAcc < 1:18777068/67‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:3930054/68‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:26799223/68‑1 (MQ=255) tAACCCGATGCCCTATCGGCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:22980949/68‑1 (MQ=255) aaCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGc < 1:32336433/68‑1 (MQ=255) aCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGcc < 1:15633694/68‑1 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGGCAGGAAATGTTATGGATGACACCAGCCg > 1:29669249/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:5182095/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:7322913/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:25868842/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:33695675/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGAGAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:26170505/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:31242297/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:4646771/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:4381604/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:6617871/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:13780314/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:30286570/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:28870517/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:27024125/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATACGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:18917985/1‑68 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:12762612‑M1/68‑1 (MQ=255) | GCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCC > CP009273/4375099‑4375232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |