| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 248303 | 121 (0.270) | 15 (0.040) | 6/96 | NT | 10.2% | coding (919/1056 nt) | dinB | DNA polymerase IV |
| ? | CP009273 | = 248351 | 159 (0.420) | coding (967/1056 nt) | dinB | DNA polymerase IV | |||||
Only 100 of 354 total aligned reads displayed.
TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTG > CP009273/248236‑248369 | tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:23448201‑M1/8‑1 (MQ=255)tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:20806613‑M1/8‑1 (MQ=255)tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgccaGCCGCGGc < 1:11531385‑M1/8‑1 (MQ=255) ccAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa > 1:10689478/1‑68 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:30886513/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:8229494/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:4658104/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:3167572/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:21093697/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:35206347/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:20384978/67‑1 (MQ=255) aGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAAt > 1:12990833/1‑68 (MQ=255) ggggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaa > 1:33555749/1‑68 (MQ=255) gggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:12280791/1‑68 (MQ=255) gggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:33154856/1‑68 (MQ=255) gTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:32558389/1‑66 (MQ=255) gAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCt < 1:13374104/67‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa < 1:2920539/67‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGAt < 1:34298725/68‑1 (MQ=255) aTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa > 1:36589241/1‑66 (MQ=255) aTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa > 1:32375846/1‑66 (MQ=255) ttAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCt > 1:26203958/1‑68 (MQ=255) ttAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCt > 1:36954020/1‑68 (MQ=255) ttAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCt > 1:24669765/1‑68 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAACGCTGATCTaa < 1:8852971/68‑1 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:26796624/68‑1 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:3608725/68‑1 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:14940663/68‑1 (MQ=255) aGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:25680621/1‑68 (MQ=255) ttCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCg > 1:27233066/1‑67 (MQ=255) gaTTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgc > 1:11021507/1‑68 (MQ=255) tttCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgcgcg < 1:21746726/68‑1 (MQ=255) tttCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgcgcg < 1:10145621/68‑1 (MQ=255) tgcagccccaccagacgcacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgcgcg < 1:17281509‑M1/39‑1 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGGggtgctcccaggttttacgcgcggtggcgattaga > 1:9846646‑M1/1‑32 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa > 1:22242876/1‑67 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa > 1:1672491/1‑67 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaaa < 1:6928081/66‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaaa < 1:18099535/66‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa < 1:2245921/65‑1 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg > 1:2418896/1‑68 (MQ=255) accCAGGAGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagcttt > 1:3739861‑M1/1‑25 (MQ=255) accCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGa > 1:32114780/1‑68 (MQ=255) accCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGa < 1:19429077/68‑1 (MQ=255) accCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGa < 1:28577875/68‑1 (MQ=255) cAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGa > 1:7749822/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCgttcatcccaggtttttcgcgcggtggcgattagatcagctttattca > 1:28209472‑M1/1‑20 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGaa > 1:720853/1‑67 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:30400679/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:19037025/1‑68 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:28663267/1‑68 (MQ=255) cacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc < 1:6781878‑M1/56‑1 (MQ=255) aGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcag > 1:19913626‑M1/1‑18 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:33318810‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:35772594‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:585213‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:8482037‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:23276917‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg > 1:29587659‑M2/1‑66 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:28406908‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:27913920‑M2/67‑2 (MQ=255) gCACGTCTGGCCGCGGCgttcatcacaggttttacgcgcggtggcgattagatcagctttattcagcc > 1:35900254‑M1/1‑17 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgcc < 1:12147506‑M2/68‑4 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGGGGGTAGAACCGGGGATGAAcgcc < 1:31164665‑M1/59‑1 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGAGCTAATCGCCCCCGCGCGTAAACCCTGGGATGAAcgcc < 1:14421787‑M1/59‑1 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCGGCTCTAATCGCCACCGCGCGTAAAACCTGGGATGAAcgcc < 1:30800006‑M1/59‑1 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:26944775‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:22615912‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcg < 1:27656792‑M2/67‑7 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcg < 1:21251115‑M2/67‑7 (MQ=255) tCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattccgccgcgg > 1:4420520‑M1/1‑12 (MQ=255) tCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcgg > 1:5693598‑M1/1‑12 (MQ=255) tCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggc < 1:9284742‑M2/68‑9 (MQ=255) gCCGCGGCgttcatcccaggttttacgctcggtggtgattagatcagctttattcagccgcggccaga < 1:12071799‑M1/68‑61 (MQ=255) gCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccaga < 1:20125560‑M1/68‑61 (MQ=255) ccGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccaga > 1:33358321‑M2/1‑55 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:33856638‑M1/67‑1 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:21185490‑M1/67‑1 (MQ=255) gcggcgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgt < 1:7548670‑M1/68‑64 (MQ=255) ggcgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgt > 1:34665844‑M1/1‑3 (MQ=255) ggCGGAATAAAGCAGATCTAATCGCCACCGCGCGGACAACCTGGGAGGCACGCCGCGGCGGGCGCGgt < 1:35529489/68‑1 (MQ=255) GGCTTAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:28915475‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:9527094‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:13889058‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:36436642‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:15589331‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:34240639‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:17666042‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:1831364‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt < 1:31528495‑M1/68‑1 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:19193615‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTCAACAAATCGCCACCGCGCGTAAAACCTGGGAGGAACGCCGCGGCGGGCGCGgt > 1:13234457‑M1/1‑68 (MQ=255) GCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGgcgc < 1:18767000‑M1/64‑1 (MQ=255) GCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgtg < 1:1641668‑M1/68‑1 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:5165474‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:36880640‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:15831931‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:24966109‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:30268776‑M1/67‑67 (MQ=255) cgttaatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:27627397‑M1/67‑67 (MQ=255) | TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTG > CP009273/248236‑248369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |