| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 910536 = | NA (NA) | 10 (0.030) | 7/92 | NT | 7.2% | intergenic (‑223/+272) | ybjE/aqpZ | putative transporter/aquaporin Z |
| ? | CP009273 | 910538 = | 158 (0.360) | intergenic (‑225/+270) | ybjE/aqpZ | putative transporter/aquaporin Z | |||||
Only 100 of 253 total aligned reads displayed.
AAACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGG > CP009273/910469‑910599 | aaCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATgg > 1:2011572/1‑68 (MQ=255) aaCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATgg < 1:28134897/68‑1 (MQ=255) aaCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATgg > 1:31986874/1‑68 (MQ=255) aaCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTACCTGAAAGGCCGGGGCGCCCCCCATg > 1:21102534/1‑68 (MQ=18) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCTGGGGCAGCCCACATGGa < 1:690952/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:32053994/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:34597844/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa > 1:19306869/1‑68 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:34476386/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:450914/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:3383174/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:33407511/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:5148330/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:16450882/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:16113904/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:33069448/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa > 1:27227703/1‑68 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:29717728/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:6062656/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:7268664/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:23264960/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:31804361/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa > 1:8072065/1‑68 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:24780474/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:25469315/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa > 1:28635670/1‑68 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:971850/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:30897080/68‑1 (MQ=255) aCTGCACCGATGTTGGTGGCGGCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:36389644/68‑1 (MQ=255) aCTGCACCGATGTTGATGGCGTCAAAATCGCCGAGGCTTTCCCTG‑AAGGCCGGGGCAGCCCACATGGa < 1:11795526/68‑1 (MQ=18) tGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGAtg < 1:24591149/68‑1 (MQ=255) cACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGAtgtg > 1:32652309/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGAtgtg < 1:31483419/67‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTgg > 1:29246021/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTgg > 1:11248404/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTgg > 1:30248508/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTgg < 1:5451353/68‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTgg < 1:26330360/68‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTgg > 1:16281283/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTgg < 1:20539376/68‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTGCCCTG‑AAGGCCGGGGCAGCCCACATGGAtgtg < 1:17044034/67‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTggg < 1:21812622/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTggg < 1:14817570/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTggg < 1:35763301/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTggg < 1:4938045/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTggg < 1:8287283/68‑1 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTgg > 1:12360960/1‑65 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTgg > 1:15996833/1‑65 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATCGATGTgg > 1:23858795/1‑65 (MQ=255) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTgc > 1:28457928/1‑67 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:29425553/1‑68 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:26191369/1‑68 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:8998138/1‑68 (MQ=39) tggtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAgg > 1:5755423/1‑67 (MQ=35) tggtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAgg > 1:10116082/1‑67 (MQ=35) ggtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc < 1:7834213/68‑1 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:32406583/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:4861150/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:10267689/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:18919355/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:10719064/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:10879763/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:14281758/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:14560001/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:28216295/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:19457255/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:21626310/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:23076521/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCCGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:22767983/1‑67 (MQ=255) tggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:3499225/1‑68 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:11119483/67‑1 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:13628722/67‑1 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:20208979/67‑1 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:34787290/67‑1 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:14978221/67‑1 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGcgcg < 1:25711035/68‑1 (MQ=35) cGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:20764788/67‑1 (MQ=35) cGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:20019708/67‑1 (MQ=35) cGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:16664838/67‑1 (MQ=35) cGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:3784741/67‑1 (MQ=35) gTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtt < 1:27170510/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:36021791/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:12304872/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:12945833/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:24192833/67‑1 (MQ=35) aaaaTCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTAc < 1:32895580/68‑1 (MQ=35) aaaaTCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTAc < 1:2664516/68‑1 (MQ=35) aTCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAgg < 1:33226727/68‑1 (MQ=35) tCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCGCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:22133337/68‑1 (MQ=18) tCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:35417597/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:7065524/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:18214303/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:18618966/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:1148422/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:36894003/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:30360367/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:9439929/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTG‑AACGCCGGGGCAGCCCACATGGATGGGGGCTGAGGGCGCGTTTTACAggg < 1:18883713/68‑1 (MQ=11) cGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:23717734/68‑1 (MQ=31) cGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:17448976/68‑1 (MQ=31) | AAACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTG‑AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGG > CP009273/910469‑910599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |