| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 910536 = | NA (NA) | 10 (0.030) | 7/92 | NT | 7.2% | intergenic (‑223/+272) | ybjE/aqpZ | putative transporter/aquaporin Z |
| ? | CP009273 | 910538 = | 158 (0.360) | intergenic (‑225/+270) | ybjE/aqpZ | putative transporter/aquaporin Z | |||||
Only 100 of 441 total aligned reads displayed.
ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 | atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgctccctcagcccacatcca < 1:9632826‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:10289386‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:8929633‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:8522711‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:7994942‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:4234197‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:34388466‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:33038409‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:28876671‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:28094592‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:24271637‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:23639245‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:18548842‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:1451600‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:11642182‑M2/1‑1 (MQ=255)atcccttacggctaccggggcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:19941696‑M2/1‑1 (MQ=255)aCTGCGCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:16107214/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:34596429/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:450914/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:30897080/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:30178182/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:12332047/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:27227703/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:26189743/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:23882389/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:1318936/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:15254170/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:19043267/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:7288950/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:7024923/1‑68 (MQ=255) tcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAt > 1:36947989‑M2/67‑68 (MQ=255) tGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGAtg < 1:24591149/68‑1 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:6055539‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:6723857‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:31305568‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:25682666‑M2/66‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccTtgt > 1:2677230‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:10582094‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:21970214‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:36797133‑M2/65‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg < 1:26330360/68‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:10723123/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:28452429/1‑68 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg < 1:5451353/68‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg < 1:23352971/68‑1 (MQ=255) tacggctaccggggcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTggg < 1:2248363‑M2/7‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTggg < 1:4938045/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTggg < 1:21812622/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTggg < 1:20156089/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTggg < 1:10935772/68‑1 (MQ=255) ccGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:1634348/1‑67 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:11230248‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:20531898‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:29198601‑M2/61‑66 (MQ=255) cggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:28199795‑M2/60‑65 (MQ=255) ggctaccgggtcgggcgcgcggtaacatccctgtaaaacgcgccctcagcccaccgccATGTGGGCt > 1:12174622‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccccatccATGTGGGCt > 1:17232739‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:22937790‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:33700628‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:28757364‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:27149138‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:7782350‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:21180043‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:25385885‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:5045849‑M2/59‑67 (MQ=255) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:29425553/1‑68 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa < 1:4818435/68‑1 (MQ=39) gctaccgggtcgggcgcgaggtaacatccgtgtaaaacgcgcgctcagcccacgtccATGTGGGCTg > 1:36062395‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacctccATGTGGGCTg > 1:32024683‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:5768375‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:19662492‑M2/58‑67 (MQ=255) tggtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAgg > 1:10116082/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:17008167/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:19457255/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:21626310/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:23076521/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:33157680/1‑67 (MQ=35) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:14775153/1‑68 (MQ=35) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:1272008/1‑68 (MQ=35) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:3499225/1‑68 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:34787290/67‑1 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:13628722/67‑1 (MQ=35) gcgggcgcgaggtaacatccctgtaaaccgcgccctcagcccacatccATGTGGGCTGAGGGCGCGt < 1:3545221‑M2/19‑1 (MQ=255) cGTCAAACTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:31591095/67‑1 (MQ=25) cGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:16664838/67‑1 (MQ=35) cGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:20764788/67‑1 (MQ=35) gTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtt < 1:5870649/67‑1 (MQ=35) gggcgcgaggtaacatccctgtaaaacgcgcccgcagcccacatccATGTGGGCTGAGGGCGCGtttt < 1:15979941‑M2/22‑1 (MQ=255) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:17835576/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:35847636/67‑1 (MQ=35) aTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACTTGGATGTGGGCTGAGGGCGCGTTTTACAgg < 1:32648460/68‑1 (MQ=25) aTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAgg < 1:32237306/68‑1 (MQ=35) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:18214303/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:30358753/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:9439929/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:1148422/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAACGCCGGGGCAGCCCACATGGATGGGGGCTGAGGGCGCGTTTTACAggg < 1:18883713/68‑1 (MQ=11) cGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:3335313/68‑1 (MQ=31) ggtaacatccctgtaaaccgccccctcagcccacacccAGGGGGGCTGAGGGCGCGTTTTACAGGGAt < 1:37165645‑M2/30‑1 (MQ=255) ggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:36339331‑M2/1‑1 (MQ=255) | ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |