| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1874084 = | 411 (0.920) | 86 (0.200) | 34/108 | NT | 17.8% | coding (122/360 nt) | yeaR | DUF1971 family protein, nitrate‑inducible |
| ? | CP009273 | 2507755 = | NA (NA) | intergenic (+32/‑55) | nupC/insL1 | nucleoside (except guanosine) transporter/IS186 transposase | |||||
Only 100 of 814 total aligned reads displayed.
AGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTT > CP009273/1874017‑1874151 | agagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgg < 1:24447595‑M1/1‑1 (MQ=255)agagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgg < 1:13776708‑M1/1‑1 (MQ=255)aGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTg > 1:11437738/1‑68 (MQ=255) gtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggg > 1:27822197‑M1/65‑66 (MQ=255) gtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggg > 1:33873838‑M1/65‑66 (MQ=255) gtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggg > 1:11851258‑M1/65‑66 (MQ=255) gtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggg > 1:21086032‑M1/65‑66 (MQ=255) gtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggg > 1:16404712‑M1/65‑66 (MQ=255) gtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggg > 1:21617352‑M1/65‑66 (MQ=255) ctctGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCGATGCATAACGGAAAGGCGTgg < 1:1838590/66‑1 (MQ=255) ctctGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTgg < 1:27046926/66‑1 (MQ=255) ctctGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTgg < 1:23175638/66‑1 (MQ=255) ctctGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGt > 1:26762307/1‑68 (MQ=255) ctctGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGt > 1:19316870/1‑68 (MQ=255) ctctGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGt > 1:3327227/1‑68 (MQ=255) ctctGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGt > 1:1129920/1‑68 (MQ=255) tattcatcggcacgttaaatcatttcaggcgtaataccacatcccttaagttagcgcttatgGGGt > 1:6060497‑M1/63‑66 (MQ=255) cACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAAc > 1:21466369/1‑67 (MQ=255) aCTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACC < 1:36929482‑M1/67‑1 (MQ=255) aCTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACC > 1:6716906‑M1/1‑67 (MQ=255) aCTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACC > 1:7278774‑M1/1‑67 (MQ=255) aCTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACC < 1:32715980‑M1/67‑1 (MQ=255) cTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAAcac > 1:4453006/1‑65 (MQ=255) cTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCC > 1:5049940‑M1/1‑67 (MQ=255) gtTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCgg > 1:34473569/1‑67 (MQ=255) gtTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCgg > 1:33566124/1‑67 (MQ=255) tcatcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGgc < 1:26175860/67‑1 (MQ=255) tcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCataagcgct > 1:35963402‑M1/1‑59 (MQ=255) tcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCataagcgct > 1:15197938‑M1/1‑59 (MQ=255) tcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGt > 1:30382713/1‑68 (MQ=255) tcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGt > 1:3171221/1‑68 (MQ=255) tcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGt > 1:3720259/1‑68 (MQ=255) tcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGt > 1:12675132/1‑68 (MQ=255) tcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGt > 1:7838526/1‑68 (MQ=255) caGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGtt < 1:763828/68‑1 (MQ=255) aGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGtt > 1:30812925/1‑67 (MQ=255) aGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGtt > 1:4091660/1‑67 (MQ=255) aGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGtt > 1:14158712/1‑67 (MQ=255) gTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCataagcgctaactt > 1:9439290‑M1/1‑54 (MQ=255) gTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCataagcgctaact < 1:14829844‑M1/67‑14 (MQ=255) gTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCataagcgctaact < 1:10727579‑M1/67‑14 (MQ=255) gTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCataagcgctaact < 1:29284366‑M1/67‑14 (MQ=255) gTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTc < 1:20173171/65‑1 (MQ=255) gTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTc < 1:21913678/65‑1 (MQ=255) gTAGCCGAGATATGTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCtt > 1:36142574/1‑68 (MQ=255) aGCCGAGATATTTGTCCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCtttt < 1:12257623/68‑2 (MQ=255) cGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTAt < 1:30994274/66‑1 (MQ=255) gagaTATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCaa < 1:14662110/68‑1 (MQ=255) caggcgtaataccacaacccttaagttagcgcttatgGGGTAAACCCCCGGGCGCGTTCCTTTATCaa < 1:17788511‑M1/31‑1 (MQ=255) ggcgtaataccacaacccttaagttagcgcttatgGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGa < 1:2738993‑M1/33‑1 (MQ=255) gaTATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGa > 1:25670543/1‑68 (MQ=255) gcgtaataccacaacccttaagttagcgcttatgGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGAt < 1:19507369‑M1/34‑1 (MQ=255) tatTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATg > 1:22498085/1‑68 (MQ=255) atTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATg > 1:17326410/1‑67 (MQ=255) atTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATg > 1:19689156/1‑67 (MQ=255) ttGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCataagcgctaacttaagggttgaacca < 1:28163763‑M1/68‑28 (MQ=255) ttGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACg < 1:5802844/68‑1 (MQ=255) aataccacaacccttaagttagcgcttatgGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACg > 1:32354595‑M1/31‑68 (MQ=255) tGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGt > 1:10913342/1‑68 (MQ=255) taccacaacccttaagttagcgcttatgGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGt < 1:34664726‑M1/39‑1 (MQ=255) gACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGt > 1:8428643/1‑67 (MQ=255) gACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGt > 1:13091432/1‑67 (MQ=255) aCCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCataagcgctaacttaagggttgaacca > 1:6353542‑M1/1‑38 (MQ=255) aCCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTc > 1:10099221/1‑68 (MQ=255) aCCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTc > 1:23002774/1‑68 (MQ=255) ccGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCg < 1:2891923/68‑1 (MQ=255) ccGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCg < 1:4920631/68‑1 (MQ=255) gCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTATATCAAGATGACGTTCGaa > 1:17073225/1‑68 (MQ=255) cccATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAata > 1:28698082/1‑68 (MQ=255) ccATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAatat > 1:35308007/1‑68 (MQ=255) ccttaagttagcgcttatgGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATAtt < 1:1572433‑M1/48‑1 (MQ=255) gCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCg > 1:25372436/1‑68 (MQ=255) gCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCg > 1:36599425/1‑68 (MQ=255) gCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCg > 1:34870751/1‑68 (MQ=255) cATAACGGAAAGGCGTGGGTAAACCCCataagcgctaacttaagggttgaaccatctgaagaatgcg > 1:8046772‑M1/1‑27 (MQ=255) cATAACGGAAAGGCGTGGGTAAACCCCataagcgctaacttaagggttgaaccatctgaagaatgcg > 1:32911921‑M1/1‑27 (MQ=255) cATAACGGAAAGGCGTGGGTAAACCCCataagcgctaacttaagggttgaaccatctgaagaatgcg > 1:7039247‑M1/1‑27 (MQ=255) aTAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGc > 1:26520914/1‑68 (MQ=255) aTAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGc > 1:3408494/1‑68 (MQ=255) agttagcgcttatgGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCa < 1:31364987‑M1/54‑1 (MQ=255) agttagcgcttatgGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCa < 1:20736432‑M1/54‑1 (MQ=255) cGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGt < 1:2389918/68‑1 (MQ=255) ggAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGt > 1:25977821/1‑67 (MQ=255) aaaGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGc < 1:20457071/67‑1 (MQ=255) aaGGCGTGGGTAAACCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggt > 1:35538089‑M1/1‑18 (MQ=255) aaGGCGTGGGTAAACCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggt > 1:31896733‑M1/1‑18 (MQ=255) aaGGCGTGGGTAAACCCCCGGGCGCGTTCGTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCa < 1:23649952/67‑1 (MQ=255) aaGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAg > 1:18137318/1‑68 (MQ=255) aGGCGTGGGTAAACCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtg < 1:18824302‑M1/68‑52 (MQ=255) ggCGTGGGTAAACCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtg > 1:9150308‑M1/1‑16 (MQ=255) ggCGTGGGTAAACCCCCGGGCGCGTTCCTTTTTCAAGATGACGGTCGAATATTCCGGCAGGTGCAgtt > 1:10377718/1‑68 (MQ=255) ggCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgtt > 1:30110829/1‑68 (MQ=255) ggCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgtt > 1:22694005/1‑68 (MQ=255) ggCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgtt > 1:5435812/1‑68 (MQ=255) ggCGTGGGTAAACCCCCGGGCGCGGTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgtt > 1:13590248/1‑68 (MQ=255) ggCGTGGGTAAACCCCCGGGCGCGGTCCTTTATCAAGATGACGTTCGAATATTACGGCAGGTGCAgtt > 1:24776063/1‑68 (MQ=255) cGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgtttg > 1:4272509/1‑68 (MQ=255) tgGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgtttgt > 1:16801223‑M1/3‑68 (MQ=255) gTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgtttgt < 1:29707089/68‑1 (MQ=255) gTGGGTAAACCCCCGGGCGCGTTACTTTATCATGATGACGTTCGAATATTCCGGCAGGTGCAgtttgt < 1:24922020/68‑1 (MQ=255) | AGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTT > CP009273/1874017‑1874151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |