| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2213096 | NA (NA) | 3 (0.010) | 3/100 | NT | NA | intergenic (‑136/+75) | osmF/bglX | putative ABC superfamily transporter periplasmic‑binding protein/beta‑D‑glucoside glucohydrolase, periplasmic |
| ? | CP009273 | = 2213103 | NA (NA) | intergenic (‑143/+68) | osmF/bglX | putative ABC superfamily transporter periplasmic‑binding protein/beta‑D‑glucoside glucohydrolase, periplasmic | |||||
Only 100 of 428 total aligned reads displayed.
GTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTA > CP009273/2213030‑2213162 | gTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCg > 1:32811920/1‑68 (MQ=255) cTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGttt > 1:10981847/1‑66 (MQ=255) cTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGttt > 1:8391737/1‑66 (MQ=255) cTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGttt > 1:16131079/1‑66 (MQ=255) ttGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGGCCGGCGTTTCCt < 1:23861184/68‑1 (MQ=255) gCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTgccg < 1:20420233‑M2/68‑5 (MQ=255) aGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATgc > 1:894036/1‑68 (MQ=255) aTTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATgcggc > 1:15668346/1‑68 (MQ=255) tCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGgcgc < 1:17250843/68‑1 (MQ=255) tCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGgcgc > 1:18453613/1‑68 (MQ=255) ttGCAGAATCAGATAAATACTTAACAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCCAg > 1:34600517/1‑67 (MQ=255) gCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAgcgc < 1:24865/68‑1 (MQ=255) gCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAgcgc < 1:1776129/68‑1 (MQ=255) gCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAgcgc < 1:19731151/68‑1 (MQ=255) gCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAgcgc < 1:1310022/68‑1 (MQ=255) gCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAgcgc < 1:30104389/68‑1 (MQ=255) aGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGcc < 1:31812103/67‑1 (MQ=255) aGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGcc < 1:27937869/67‑1 (MQ=255) aaTCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTa > 1:4943170/1‑68 (MQ=255) aTCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTa > 1:9133640/1‑67 (MQ=255) aTAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCgg > 1:29375743/1‑67 (MQ=255) aTAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCgg > 1:2742377/1‑67 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCgg < 1:30545423/66‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCgg < 1:30954311/66‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCgg < 1:30291510/66‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCgg < 1:10469820/66‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCgg < 1:15252906/66‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCgg < 1:12266839/66‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCgg < 1:37016236/66‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGcc < 1:35128890/68‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGcc < 1:33032685/68‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGcc < 1:10583124/68‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGcc < 1:23017509/68‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGcc < 1:34423598/68‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGc < 1:36822191/67‑1 (MQ=255) tAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGc < 1:7107534/67‑1 (MQ=255) aaaTACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCt > 1:4238747/1‑68 (MQ=255) aaTACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTa < 1:4745821/68‑1 (MQ=255) aaTACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTa < 1:11358701/68‑1 (MQ=255) aaTACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTa < 1:15550434/68‑1 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACaa > 1:6371521/1‑68 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACaa > 1:35599803/1‑68 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACaa > 1:32078049/1‑68 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACaa > 1:2777779/1‑68 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACaa > 1:12525148/1‑68 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACaa > 1:13313475/1‑68 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACaa > 1:14506123/1‑68 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACaa > 1:20212526/1‑68 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACaa > 1:21513305/1‑68 (MQ=255) aCTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGAGCCTTATCCTGCCTACaa > 1:21750347/1‑68 (MQ=255) agagGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgc > 1:7592169/1‑68 (MQ=255) agagGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgc > 1:26167649/1‑68 (MQ=255) agagGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgc > 1:13658907/1‑68 (MQ=255) agagGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgc > 1:8129385/1‑68 (MQ=255) agagGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgc < 1:28518046/68‑1 (MQ=255) agagGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgc > 1:11769878/1‑68 (MQ=255) gagGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgc > 1:10280316/1‑67 (MQ=255) ggCATATTCGGTCCGGCGTTTCCTGCCTGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCa > 1:34230607/1‑68 (MQ=255) ggCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTATAAAGGGCGCa > 1:25224808/1‑68 (MQ=255) ggCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgcg < 1:20742501/66‑1 (MQ=255) ggCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGgcg < 1:23337351/66‑1 (MQ=255) ggCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCa > 1:14876780/1‑68 (MQ=255) ggCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCa > 1:1822546/1‑68 (MQ=255) tatTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACg < 1:24363714/68‑1 (MQ=255) tatTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACg < 1:6534960/68‑1 (MQ=255) tatTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACg < 1:14054859/68‑1 (MQ=255) atTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACg > 1:26512275/1‑67 (MQ=255) ttCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTc > 1:11939934/1‑68 (MQ=255) tCGGTCCGGCGTTTCCTGCCGTATGCGGCGCGAGCGCCTTATCCGGCCTACAAACCGCGCAAACGTc > 1:5798209/1‑67 (MQ=21) tCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTATAAAGGGCGCAAACGTc > 1:36587238/1‑67 (MQ=255) tCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTc > 1:36519286/1‑67 (MQ=255) tCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTc > 1:36229896/1‑67 (MQ=255) tCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTc > 1:28235249/1‑67 (MQ=255) tCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTc > 1:33694787/1‑67 (MQ=255) tCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTc > 1:25640542/1‑67 (MQ=255) tCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTc > 1:29919245/1‑67 (MQ=255) tCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTc > 1:12696578/1‑67 (MQ=255) ggTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTcgcg < 1:1121544/68‑1 (MQ=255) ggTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTcgcg < 1:8457763/68‑1 (MQ=255) tCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCgcgc < 1:5058163/67‑1 (MQ=255) ccGGCGTTTCCTgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttccg > 1:35918442‑M2/1‑12 (MQ=255) cGGCaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttccgc < 1:34038604‑M1/68‑65 (MQ=255) cGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCt < 1:31513268/68‑1 (MQ=255) ggCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCtt < 1:22842273/68‑1 (MQ=255) ggCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCtt < 1:18577945/68‑1 (MQ=255) ggCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCtt < 1:23704173/68‑1 (MQ=255) gCaggaaacgccggcccgaatatgcctcttaagtatttatctgattctgcaactgaatccttccgctc > 1:687208‑M1/1‑2 (MQ=255) gCaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttccgctc > 1:20954526‑M1/1‑2 (MQ=255) gCaggaaacgccggaccgaatatgcctcttaagtatttatctgattctgcaactgaatccttccgctc > 1:32507263‑M1/1‑2 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCtt > 1:5401278/1‑66 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCtt > 1:16559105/1‑66 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa < 1:8325348/67‑1 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa < 1:9377997/67‑1 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa < 1:13690987/67‑1 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa < 1:3733541/67‑1 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa < 1:16971546/67‑1 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa < 1:19150354/67‑1 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa < 1:32327110/67‑1 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa < 1:22019940/67‑1 (MQ=255) cGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTa < 1:2952863/67‑1 (MQ=255) | GTTAGCTTGAGCGGAAGGATTCAGTTGCAGAATCAGATAAATACTTAAGAGGCATATTCGGTCCGGCGTTTCCTGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACAAAGGGCGCAAACGTCGCGCCCTTA > CP009273/2213030‑2213162 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |