New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2293603 =376 (0.840)14 (0.040) 6/92 NT 5.3% coding (137/696 nt) napG ferredoxin‑type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)
?CP009273 2293630 = 188 (0.510)coding (110/696 nt) napG ferredoxin‑type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB)

Only 100 of 547 total aligned reads displayed.

AACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCC  >  CP009273/2293536‑2293669
                                                                   |                                                                  
 gcgcgatgtcgttcgcacagcaggcgggctggctgccgtgggtgtggcgctggggttacaacagcaac                                                                   <  1:11405357‑M1/2‑2 (MQ=255)
 acacacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCa                                                                    >  1:8771180/1‑67 (MQ=255)
 acacacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCa                                                                    >  1:26772074/1‑67 (MQ=255)
 acacacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCa                                                                    >  1:292581/1‑67 (MQ=255)
 acacacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCa                                                                    >  1:12278423/1‑67 (MQ=255)
 acacacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCa                                                                    >  1:11833001/1‑67 (MQ=255)
  cacacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCaa                                                                   >  1:16864474/1‑67 (MQ=255)
   gcgatgtcgttcgcacagcaggcgggctggctgccgtgggtgtggcgctggggttacaacagcaAAcc                                                                 <  1:36684328‑M1/4‑1 (MQ=255)
   gcgatgtcgttcgcacagcaggcgggctggctgccgtgggtgtggcgctggggttacaacagcaAAcc                                                                 <  1:31860818‑M1/4‑1 (MQ=255)
   acacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAAcc                                                                 <  1:2735861/68‑1 (MQ=255)
   acacTGACCGCAACGCACACAGGCACTGGCAAAGGCGGTCTCGTTTATGGCTCCGGGCGGGCGCAAcc                                                                 <  1:25456457/68‑1 (MQ=255)
    cacTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAAcc                                                                 >  1:6009506/1‑67 (MQ=255)
     acTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGc                                                               >  1:7852800/1‑68 (MQ=255)
     acTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGc                                                               >  1:10658165/1‑68 (MQ=255)
      cTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCa                                                              <  1:5715132/68‑1 (MQ=255)
      cTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCa                                                              <  1:19240211/68‑1 (MQ=255)
       tgtcgttcgcacagcaggcgggctggctgccgtgggtgtggcgctggggttacaacagcaAACCGCa                                                              >  1:10489506‑M1/61‑67 (MQ=255)
        gACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcg                                                            >  1:6493617‑M2/1‑66 (MQ=255)
        gACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcg                                                            >  1:8569086‑M2/1‑66 (MQ=255)
        gACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcg                                                            >  1:10271091‑M2/1‑66 (MQ=255)
        gACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcg                                                            >  1:10096924‑M2/1‑66 (MQ=255)
        gACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcg                                                            >  1:13911573‑M2/1‑66 (MQ=255)
         aCCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcg                                                            <  1:34297773‑M2/67‑3 (MQ=255)
         aCCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcg                                                            <  1:23071242‑M2/67‑3 (MQ=255)
         aCCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcg                                                            <  1:22270767‑M2/67‑3 (MQ=255)
          ccGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcgcc                                                          >  1:17928043‑M2/1‑64 (MQ=255)
          ccGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcgcc                                                          >  1:24925247‑M2/1‑64 (MQ=255)
          ccGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCAcgcc                                                          >  1:24205394‑M2/1‑64 (MQ=255)
            gCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAg                                                        <  1:32564226/68‑1 (MQ=255)
               aCGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGAt                                                      >  1:20716278/1‑67 (MQ=255)
               aCGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATg                                                     <  1:35542648/68‑1 (MQ=255)
                 gCACACAGGCACTGGCAAAGGCGTTCTCGTTTTTGGCTCCGGGCGGGCGCAACCGCACGCCAGATgcg                                                   <  1:26461005/68‑1 (MQ=255)
                 gCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATgcg                                                   <  1:18441942/68‑1 (MQ=255)
                 gCACACAGGCACTGGCAAAGGCGTGCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATgcg                                                   <  1:24391410/68‑1 (MQ=255)
                   acacaGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGcgcg                                                 >  1:16961144/1‑68 (MQ=255)
                   acacaGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGcgcg                                                 >  1:32956166/1‑68 (MQ=255)
                    cacaGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGt                                                >  1:30550268/1‑68 (MQ=255)
                        ggCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCgg                                            >  1:26330748/1‑68 (MQ=255)
                         gCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGt                                           >  1:6901289/1‑68 (MQ=255)
                          cACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGtt                                          >  1:30418612/1‑68 (MQ=255)
                          cACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGt                                           <  1:13207734/67‑1 (MQ=255)
                          cACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGt                                           <  1:15450299/67‑1 (MQ=255)
                           ggctggctgccgtgggtgtggcgctggggttacaacagcaAACCGCACGCCAGATGCGCGTGCGGtt                                          <  1:32818866‑M1/27‑1 (MQ=255)
                           ggctggctgccgtgggtgtggcgctggggttacaacagcaAACCGCACGCCAGATGCGCGTGCGGtt                                          <  1:31417635‑M1/27‑1 (MQ=255)
                           ggctggctgccgtgggtgtggcgctggggttacaacagcaAACCGCACGCCAGATGCGCGTGCGGtt                                          <  1:28778395‑M1/27‑1 (MQ=255)
                           ggctggctgccgtgggtgtggcgctggggttacaacagcaAACCGCACGCCAGATGCGCGTGCGGtt                                          <  1:3598610‑M1/27‑1 (MQ=255)
                           aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         <  1:14389684/68‑1 (MQ=255)
                           aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:28491061/1‑68 (MQ=255)
                           aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:22114340/1‑68 (MQ=255)
                           aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         <  1:15127694/68‑1 (MQ=255)
                           aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:1959196/1‑68 (MQ=255)
                           aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:21941634/1‑68 (MQ=255)
                           aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         <  1:15873367/68‑1 (MQ=255)
                           aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGAGTGCGGttt                                         >  1:27791866/1‑68 (MQ=255)
                            cTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTg                                        <  1:26853015/68‑1 (MQ=255)
                             tGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:12005628/1‑66 (MQ=255)
                               gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:30108364/1‑64 (MQ=255)
                               gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:4482212/1‑64 (MQ=255)
                               gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:1346165/1‑64 (MQ=255)
                               gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:356918/1‑64 (MQ=255)
                               gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:26108592/1‑64 (MQ=255)
                               gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:25860498/1‑64 (MQ=255)
                               gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:36524667/1‑64 (MQ=255)
                               gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt                                         >  1:23454534/1‑64 (MQ=255)
                                 aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt                                    <  1:1090618/67‑1 (MQ=255)
                                 aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt                                    <  1:36227532/67‑1 (MQ=255)
                                 aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt                                    <  1:4345348/67‑1 (MQ=255)
                                 aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt                                    <  1:9412994/67‑1 (MQ=255)
                                 aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt                                    <  1:16300871/67‑1 (MQ=255)
                                  aaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgttg                                  <  1:4813623/68‑1 (MQ=255)
                                  aaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgttg                                  <  1:23714470/68‑1 (MQ=255)
                                   aGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgttgt                                 >  1:9067534/1‑68 (MQ=255)
                                     gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTa                                >  1:30983526/1‑67 (MQ=255)
                                     gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTa                                >  1:8132340/1‑67 (MQ=255)
                                     gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTa                                >  1:27551898/1‑67 (MQ=255)
                                     gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTa                                >  1:14832055/1‑67 (MQ=255)
                                       gTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAAcc                             <  1:28159290/68‑1 (MQ=255)
                                           ccgGTTATGGCGCCGGGCGGGCGCAACCGCAcgcccggagccataaacgagaacgcctttgccagtgc                         >  1:33616141‑M2/2‑31 (MQ=255)
                                            cGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAgc                        <  1:712272/68‑1 (MQ=255)
                                             gTTTATGGCTCCGGGCGGGCGCAACCTCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAgcg                       <  1:35116828/68‑1 (MQ=255)
                                              tttATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAgcg                       >  1:3326433/1‑67 (MQ=255)
                                               ttATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCAAGCGcc                     >  1:33988180/1‑68 (MQ=255)
                                               ttATGGCCCCGCGCGGGCGCAACCGCAcgcccggagccataaacgagaacgcctttgccagtgcctg                      >  1:16726483‑M2/1‑27 (MQ=255)
                                                 aTGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcac                   >  1:21669938/1‑68 (MQ=255)
                                                 aTGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcac                   >  1:37096811/1‑68 (MQ=255)
                                                   ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcaca                  >  1:23946331/1‑67 (MQ=255)
                                                   ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcaca                  >  1:18972029/1‑67 (MQ=255)
                                                   ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCacac                 <  1:19765786/68‑1 (MQ=255)
                                                    gCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCacac                 >  1:5218493/1‑67 (MQ=255)
                                                     cTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACAccc               >  1:34719145/1‑68 (MQ=255)
                                                           gcgggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGca         >  1:12660965/1‑68 (MQ=255)
                                                           gcgggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGca         >  1:25248033/1‑68 (MQ=255)
                                                            cgggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCCCACCCACGGca         >  1:24638608/1‑67 (MQ=255)
                                                            cgggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGca         <  1:29665591/67‑1 (MQ=255)
                                                            aacagcaAACCGCTCGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGca         <  1:31726495‑M1/60‑1 (MQ=255)
                                                             gggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagc       <  1:11206435/68‑1 (MQ=255)
                                                             acagcaAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcag        <  1:6293783‑M1/61‑1 (MQ=255)
                                                              ggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagcc      >  1:17440665/1‑68 (MQ=255)
                                                                cgcAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagcca     <  1:21154773/67‑1 (MQ=255)
                                                                  aAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagccagc   <  1:32105070‑M1/66‑1 (MQ=255)
                                                                   |                                                                  
AACACACTGACCGCAACGCACACAGGCACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCC  >  CP009273/2293536‑2293669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.