| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2293603 = | 376 (0.840) | 14 (0.040) | 6/92 | NT | 5.3% | coding (137/696 nt) | napG | ferredoxin‑type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) |
| ? | CP009273 | 2293630 = | 188 (0.510) | coding (110/696 nt) | napG | ferredoxin‑type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) | |||||
Only 100 of 416 total aligned reads displayed.
ACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAG > CP009273/2293563‑2293697 | aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt < 1:14389684/68‑1 (MQ=255)aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt > 1:1959196/1‑68 (MQ=255)aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt < 1:29084251/68‑1 (MQ=255)aCTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGACAGATGCGCGTGCGGttt > 1:8876332/1‑68 (MQ=255) gctggctgccgtgggtgtggcgctggggttacaacagcaaaccgcacgcgcatctggcgtgcggttt < 1:32701505‑M2/1‑1 (MQ=255) tggctgccgtgggtgtggcgctggggttacaacagcaaaccgcacgcgcatctggcgtgcggttTGc < 1:21617657‑M2/3‑1 (MQ=255) gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt > 1:10814625/1‑64 (MQ=255) gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt > 1:23225084/1‑64 (MQ=255) gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt > 1:25168685/1‑64 (MQ=255) gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt > 1:27631838/1‑64 (MQ=255) gCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGttt > 1:4482212/1‑64 (MQ=255) gctgccgtgggtggggcgctggggcgacaacagcaaaccgcacgcgcatctggcgtgcggttTGCtgt < 1:4913609‑M2/6‑1 (MQ=255) ctgccgtgggtgtggcgctggggttacaacagcaaaccgcacgcgcatctggcgtgcggttTGCtgt < 1:19213073‑M2/6‑1 (MQ=255) ctgccgtgggtgtggcgctggggttacaacagcaaaccgcacgcgcatctggcgtgcggttTGCtgt < 1:6675328‑M2/6‑1 (MQ=255) aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgtt < 1:14634303/68‑1 (MQ=255) aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt < 1:26416880/67‑1 (MQ=255) aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt < 1:4345348/67‑1 (MQ=255) aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt < 1:36227532/67‑1 (MQ=255) aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt < 1:25314514/67‑1 (MQ=255) aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt < 1:34944795/67‑1 (MQ=255) aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt < 1:28267789/67‑1 (MQ=255) aaaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgt < 1:12975251/67‑1 (MQ=255) aaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgttg < 1:31029972/68‑1 (MQ=255) aaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgttg < 1:165269/68‑1 (MQ=255) aaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgttg < 1:23714470/68‑1 (MQ=255) aaGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCtgttg < 1:29570189/68‑1 (MQ=255) ggCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGCTTTGCTGTTGTa > 1:15595183/1‑68 (MQ=255) gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGTGCGTGCGGTTTGCTGTTGTa > 1:9244609/1‑67 (MQ=255) gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTTCTGTTGTa > 1:35840020/1‑67 (MQ=255) gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTa > 1:36766320/1‑67 (MQ=255) gCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTa > 1:30005293/1‑67 (MQ=255) gTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAAcc < 1:23992968/68‑1 (MQ=255) ctcGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCa < 1:1200055/68‑1 (MQ=255) cgattATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAgc < 1:462684/65‑1 (MQ=255) cGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAgc < 1:712272/68‑1 (MQ=255) gTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAgcg < 1:24342624/68‑1 (MQ=255) tttATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAgcg > 1:3326433/1‑67 (MQ=255) aTGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcac > 1:34487459/1‑68 (MQ=255) aTGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcac > 1:31696388/1‑68 (MQ=255) ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcaca > 1:1524045/1‑67 (MQ=255) ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcaca > 1:16827340/1‑67 (MQ=255) ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcaca > 1:18972029/1‑67 (MQ=255) ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcaca > 1:35344635/1‑67 (MQ=255) ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcaca > 1:13953407/1‑67 (MQ=255) ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCacac < 1:17622336/68‑1 (MQ=255) ggCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCacac < 1:3470901/68‑1 (MQ=255) gCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCcaccc > 1:27337083/1‑65 (MQ=255) gCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCacac > 1:34229868/1‑67 (MQ=255) cTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAGCCCCCGCGCCACAcc > 1:22629517/1‑67 (MQ=255) tCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACcccc > 1:26806620/1‑67 (MQ=255) tCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACAccc > 1:10550108/1‑67 (MQ=255) ggcgggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGc > 1:33619361/1‑68 (MQ=255) gcgggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGca > 1:24777738/1‑68 (MQ=255) gcgggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGca > 1:28588339/1‑68 (MQ=255) cgggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGca > 1:1490184/1‑67 (MQ=255) gggcgCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagc < 1:11206435/68‑1 (MQ=255) acagcaAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcag < 1:6293783‑M1/61‑1 (MQ=255) cgcAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagcca < 1:21154773/67‑1 (MQ=255) cgcAACCGCACCCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagcca < 1:22084046/67‑1 (MQ=255) aAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGcagccagc < 1:16216431‑M1/66‑1 (MQ=255) aaccgcacgcgcatctggcgtgcggttTGCTGTTGTAACCCCAGCGCCACACCCACGGCagccagcc < 1:3598610‑M2/40‑1 (MQ=255) aaccgcacgcgcatctggcgtgcggttTGCTGTTGTAACCCCAGCGCCACACCCACGGCagccagcc < 1:31417635‑M2/40‑1 (MQ=255) AACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCagccagcc > 1:1975088‑M1/1‑67 (MQ=255) AACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCagccagcc > 1:31776276‑M1/1‑67 (MQ=255) ACCGCACGCCAGATGCTCGTGCGGATTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCg > 1:6333309‑M1/1‑68 (MQ=255) ACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGccc < 1:10216110‑M1/67‑1 (MQ=255) ACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGccc < 1:31199760‑M1/67‑1 (MQ=255) ACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCg > 1:12516392‑M1/1‑68 (MQ=255) ccgcacgcgcatctggcgtgcggttTGCTGTTGTAACCCCAGCGCCacac < 1:36631225‑M2/25‑1 (MQ=255) CCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCg < 1:25700257‑M1/67‑1 (MQ=255) CCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCg < 1:5922230‑M1/67‑1 (MQ=255) CGCACGCCGGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCg < 1:24213845‑M1/66‑1 (MQ=255) CGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCg < 1:18262531‑M1/66‑1 (MQ=255) CGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGcc > 1:25487949‑M1/1‑68 (MQ=255) tGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGc < 1:10415851/65‑1 (MQ=255) tGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGc < 1:29698694/65‑1 (MQ=255) tGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGa > 1:17264380/1‑67 (MQ=255) tGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGa > 1:27885878/1‑67 (MQ=255) tGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGa > 1:21696292/1‑67 (MQ=255) tGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGa > 1:20639300/1‑67 (MQ=255) tGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGa < 1:37135680/67‑1 (MQ=255) tGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGa > 1:28777626/1‑67 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCCGCCCGCCTGCTGTGCGAACg > 1:13355523/1‑68 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGCAc > 1:22256000/1‑67 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAAc > 1:1001025/1‑67 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAAc > 1:2141351/1‑67 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAAc > 1:20298911/1‑67 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACg > 1:11643530/1‑68 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACg > 1:5472866/1‑68 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACg > 1:32033708/1‑68 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACg > 1:30278385/1‑68 (MQ=255) cgcgTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACg > 1:27474357/1‑68 (MQ=255) cgtgcggttTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGAc > 1:26091874‑M2/10‑68 (MQ=255) cgtgcggttTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGAc > 1:8456473‑M2/10‑68 (MQ=255) gcggttTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACAt < 1:8031151‑M2/61‑1 (MQ=255) gcggttTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATc > 1:3287571‑M2/7‑68 (MQ=255) ggttTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATcgc > 1:11342817‑M2/5‑68 (MQ=255) ggttTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATcgc > 1:12141634‑M2/5‑68 (MQ=255) ttTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATcgcg < 1:32280567‑M2/65‑1 (MQ=255) tGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAg < 1:25905160/68‑1 (MQ=255) | ACTGGCAAAGGCGTTCTCGTTTATGGCTCCGGGCGGGCGCAACCGCACGCCAGATGCGCGTGCGGTTTGCTGTTGTAACCCCAGCGCCACACCCACGGCAGCCAGCCCGCCTGCTGTGCGAACGACATCGCGCAG > CP009273/2293563‑2293697 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |