| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2458952 | 260 (0.580) | 14 (0.040) | 9/94 | NT | 5.5% | coding (173/933 nt) | yfdC | putative inner membrane protein |
| ? | CP009273 | = 2458965 | 267 (0.710) | coding (186/933 nt) | yfdC | putative inner membrane protein | |||||
Only 100 of 550 total aligned reads displayed.
CGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATT > CP009273/2458885‑2459018 | cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC > 1:3430218‑M1/1‑68 (MQ=255)cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:7606237‑M1/68‑1 (MQ=255)cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:224436‑M1/68‑1 (MQ=255)cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC > 1:9382351‑M1/1‑68 (MQ=255)cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:4964592‑M1/68‑1 (MQ=255)cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:30898549‑M1/68‑1 (MQ=255)cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:31919183‑M1/68‑1 (MQ=255)cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:11866813‑M1/68‑1 (MQ=255)cGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC < 1:34063024‑M1/68‑1 (MQ=255) ggCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC > 1:7060755‑M1/1‑66 (MQ=255) ggCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC > 1:15890882‑M1/1‑66 (MQ=255) ggCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGC > 1:19463064‑M1/1‑66 (MQ=255) gCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt > 1:26077175/1‑68 (MQ=255) cGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt < 1:12696661/67‑1 (MQ=255) cGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt < 1:2921287/67‑1 (MQ=255) cGATGGCAATACATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt < 1:30022886/67‑1 (MQ=255) gATGGCAATTCATGAGCATTTCCGACAGGATGGTGAAAAAGAGCTGGAAAGCGACGCAATGGCGCTAc < 1:20744779/68‑1 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCt > 1:19028094/1‑66 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTAc < 1:22321069/68‑1 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTAc < 1:21799717/68‑1 (MQ=255) gATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTAc < 1:10601728/68‑1 (MQ=255) gCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACtgtg > 1:34437283/1‑68 (MQ=255) cAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACtgtg < 1:30340469/67‑1 (MQ=255) ttCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCa < 1:35869235/68‑1 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:12094368‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:23995720‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:16305233‑M2/1‑65 (MQ=255) aGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:3816055‑M2/68‑7 (MQ=255) aGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:36895146‑M2/68‑7 (MQ=255) aGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGAGACGCAATGGCGATACTGTGGTCAgccatt < 1:24830294‑M2/68‑7 (MQ=255) gCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:5910060‑M2/67‑7 (MQ=255) gCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:11420138‑M2/67‑7 (MQ=255) gCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:27749413‑M2/67‑7 (MQ=255) gCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:14650323‑M2/67‑7 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgcg < 1:17809682‑M2/68‑10 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattg > 1:26990943‑M2/1‑59 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGAGACGCAATGGCGCTACTGTGGGCAgccattg > 1:23765010‑M2/1‑59 (MQ=255) tCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGAAGCAATGGCGCTACTGTGGTCAGCCATTgcggcg > 1:28059214/1‑68 (MQ=255) cGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg < 1:21529987/68‑1 (MQ=255) cGCCAGGATGGTGAAAAAGAGCTCGAACGCGACGCAATGGCGCTACTGTGGGCACCCATTGCGGCggg < 1:35641115/68‑1 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg > 1:12377574/1‑67 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:26804625/68‑1 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:29901781/68‑1 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:14428607/68‑1 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:20206870/68‑1 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGAGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:33836117/68‑1 (MQ=255) ccAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGGtgcccaccggagcgccattgcgtcgcgtt > 1:27169620‑M1/1‑39 (MQ=255) cAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg > 1:23207291/1‑65 (MQ=255) cAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCt < 1:17192052/68‑1 (MQ=255) aTGGTGAAAACGCGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:25539017/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:10196639/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:6678638/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:3150648/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:23500837/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:9026802/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:8294949/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCg > 1:13497779/1‑68 (MQ=255) gAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATgg > 1:35040623/1‑67 (MQ=255) gAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATgg > 1:36034316/1‑67 (MQ=255) gAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGGCAGCCATTGCGGCGGGTCTGTCGATggg < 1:18817612/68‑1 (MQ=255) aaaaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGgc < 1:29505894/67‑1 (MQ=255) aaGCGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:24389281/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:8092364/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:19753624/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:1307133/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:17614419/1‑68 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:18298901/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGGCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:18132351/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGGCAGCCATTGCGGCGGGGCTGTCGATGGGCGCt < 1:31198174/68‑1 (MQ=255) agagCTGGAACGCGACGCAATGGCggcccccagtagcgccattgcgtcgcgttccagctcgttttca > 1:27633081‑M1/1‑24 (MQ=255) agCTGGAACGCGACGCAATGGCtggccacagttgcgccattgcgtcgcggtcccgctctttttcacca > 1:36478315‑M1/1‑22 (MQ=255) gCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTc < 1:32866803/66‑1 (MQ=255) tGGAACGCTACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGt < 1:9555722/66‑1 (MQ=255) tGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGt < 1:32377249/66‑1 (MQ=255) tGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGt < 1:16551593/66‑1 (MQ=255) aaCGCGCCGCAATGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctg > 1:16136970‑M1/1‑16 (MQ=255) aaCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTg > 1:15124697/1‑68 (MQ=255) aaCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTg > 1:4689842/1‑68 (MQ=255) aCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTgg < 1:5559274/68‑1 (MQ=255) cgcgACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGc < 1:29766944/68‑1 (MQ=255) cgcgACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGc < 1:33220287/68‑1 (MQ=255) gCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAgg < 1:13955100/68‑1 (MQ=255) gCAATGGCGCTACTGTGGGCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAgg < 1:3532499/68‑1 (MQ=255) cAATGGCtgaccacagtagcgccattgcgtcgcgttccagctcgttttcaccatcctggcggatat > 1:7291976‑M1/1‑7 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgct < 1:25758002‑M1/68‑63 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgc < 1:26553936‑M1/67‑62 (MQ=255) aaTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgc < 1:15798661‑M1/67‑62 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:28453471/67‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:24581986/67‑1 (MQ=255) aaTGGCGCTACTGTGGGCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:27432663/67‑1 (MQ=255) aTGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctc > 1:1695692‑M1/1‑5 (MQ=255) tGGCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctca < 1:5520459‑M1/68‑65 (MQ=255) ggCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcat > 1:25884610‑M1/1‑3 (MQ=255) ggCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcat > 1:8221596‑M1/1‑3 (MQ=255) ggCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcat > 1:29134403‑M1/1‑3 (MQ=255) ggCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcat > 1:9170664‑M1/1‑3 (MQ=255) ggCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcat > 1:34860526‑M1/1‑3 (MQ=255) ggCtgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcat > 1:34667957‑M1/1‑3 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat < 1:28722945/68‑1 (MQ=255) ctgaccacagtagcgccattgcgtcgcgttccagctctttttcaccatcctggcggatatgctcatg < 1:22882910‑M1/67‑67 (MQ=255) | CGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATT > CP009273/2458885‑2459018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |