| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2458952 | 260 (0.580) | 14 (0.040) | 9/94 | NT | 5.5% | coding (173/933 nt) | yfdC | putative inner membrane protein |
| ? | CP009273 | = 2458965 | 267 (0.710) | coding (186/933 nt) | yfdC | putative inner membrane protein | |||||
Only 100 of 483 total aligned reads displayed.
TTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTG > CP009273/2458898‑2459031 | ttCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCa < 1:19171124/68‑1 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:97387‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:34667957‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:29789325‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:9170664‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:26944332‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:8221596‑M2/1‑65 (MQ=255) aTGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgcc > 1:16305233‑M2/1‑65 (MQ=255) gAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccat > 1:25821821‑M2/1‑63 (MQ=255) gAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccat > 1:5018739‑M2/1‑63 (MQ=255) aGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:22349272‑M2/68‑7 (MQ=255) aGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:3816055‑M2/68‑7 (MQ=255) gCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccatt < 1:1814580‑M2/67‑7 (MQ=255) atatCCGCCAGGATGGTGAAAACGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattg > 1:7291976‑M2/1‑59 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgcg > 1:17810888‑M2/1‑59 (MQ=255) atatCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgc > 1:6474905‑M2/1‑59 (MQ=255) tCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTgcggcg > 1:11303251/1‑68 (MQ=255) tCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGAAGCAATGGCGCTACTGTGGTCAGCCATTgcggcg > 1:28059214/1‑68 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg > 1:1299650/1‑67 (MQ=255) gCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGt < 1:14428607/68‑1 (MQ=255) cAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAgccattgcggcgcgtt > 1:16136970‑M2/1‑51 (MQ=255) cAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg > 1:23207291/1‑65 (MQ=255) cAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTc < 1:6967608/67‑1 (MQ=255) cAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTc < 1:3562168/67‑1 (MQ=255) cAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCt < 1:17192052/68‑1 (MQ=255) ggATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg > 1:31915693/1‑63 (MQ=255) ggATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCggg > 1:34158735/1‑63 (MQ=255) aTGGTGAAAACGCGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:25539017/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:33739045/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:5903357/66‑1 (MQ=255) aTGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGt < 1:15884460/66‑1 (MQ=255) ggTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGAt < 1:35880070/68‑1 (MQ=255) tGAAAACGAGCTGGAACGCGACGCAATGGCGCTACTGGGGGCCgccattgcgtcgcgttccagctct > 1:27633081‑M2/1‑43 (MQ=255) gAAATAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATgg < 1:16644272/67‑1 (MQ=255) gAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATgg > 1:35040623/1‑67 (MQ=255) gAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGGCAGCCATTGCGGCGGGTCTGTCGATggg < 1:18817612/68‑1 (MQ=255) aaaaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGgc < 1:29505894/67‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCTTTGCGGCGGGTCTGTCGATGGGCGCt < 1:24598681/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:20619852/68‑1 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:29293464/1‑68 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:27803156/1‑68 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:17614419/1‑68 (MQ=255) aaGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:13340993/68‑1 (MQ=255) aaGAGCTGGAACCCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:31144237/68‑1 (MQ=255) aaGAGCTGCAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt < 1:8073025/68‑1 (MQ=255) agagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:24834841/1‑67 (MQ=255) agagCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCt > 1:27095018/1‑67 (MQ=255) gCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTc < 1:32866803/66‑1 (MQ=255) gCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTc < 1:2968219/66‑1 (MQ=255) tGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGt < 1:16832298/66‑1 (MQ=255) aaCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTa > 1:35290106/1‑65 (MQ=255) aaCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTg > 1:34429349/1‑68 (MQ=255) aaCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTg > 1:32414510/1‑68 (MQ=255) aaCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTg > 1:15124697/1‑68 (MQ=255) aCGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTgg < 1:5559274/68‑1 (MQ=255) cgcgACGCAATGGCGCTACTGTGGTCTGCGATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGc < 1:29118322/68‑1 (MQ=255) gCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAgg < 1:13955100/68‑1 (MQ=255) gCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAgg < 1:22514448/68‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:28453471/67‑1 (MQ=255) aaTGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAggg < 1:33845812/67‑1 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGTCGCTTCGTTACTGGCAAAATTGatat < 1:30567789/68‑1 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat < 1:28722945/68‑1 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat < 1:29930266/68‑1 (MQ=255) ggCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat > 1:31240996/1‑68 (MQ=255) ggCGCTACTGTGGGCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGatat < 1:19710541/68‑1 (MQ=255) gcTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTc > 1:33344796/1‑68 (MQ=255) gcTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTc > 1:2641882/1‑68 (MQ=255) cTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCa > 1:23429632/1‑68 (MQ=255) cTGTGGGCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGt < 1:21946266/68‑1 (MQ=255) tgtgGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTTAAGTc > 1:8403713/1‑68 (MQ=255) tgtgGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTc > 1:12146261/1‑68 (MQ=255) tgtgGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTc > 1:7677015/1‑68 (MQ=255) tgtgGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTc > 1:23705948/1‑68 (MQ=255) tgtgGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTc > 1:22786131/1‑68 (MQ=255) tgtgGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTAATGGCAAAAGGGATATTTCAAGTc > 1:11809981/1‑68 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:5413531/67‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:9542808/67‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:21535888/67‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:4393203/67‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:14555158/67‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:37030992/1‑67 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:36445554/1‑67 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:36288032/67‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:15624023/1‑67 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:23969914/1‑67 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:26803639/1‑67 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa < 1:1018090/67‑1 (MQ=255) ggTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:18326543/1‑67 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:27472202/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:26061647/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:19835774/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGa > 1:10468589/1‑65 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAAc < 1:32199626/67‑1 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAAc < 1:24204073/67‑1 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAAc < 1:20270685/67‑1 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAAc < 1:8830559/67‑1 (MQ=255) tCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTCACTGGCAAAAGGGATATTTCAAGTCGa > 1:36046774/1‑65 (MQ=255) gcAGCCATTGCGGGGGTTCTGTCGATGGGCGCTTCGGTACTGGCAAAAGGGATATTTCAAGTCGacc < 1:10742646/66‑3 (MQ=255) cAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACt < 1:12453267/67‑1 (MQ=255) aGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTg < 1:12110257/67‑1 (MQ=255) | TTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTG > CP009273/2458898‑2459031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |