| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2901356 | 229 (0.510) | 18 (0.050) | 9/88 | NT | 8.4% | intergenic (‑56/+32) | eno/pyrG | enolase/CTP synthetase |
| ? | CP009273 | = 2901357 | 213 (0.610) | intergenic (‑57/+31) | eno/pyrG | enolase/CTP synthetase | |||||
Only 100 of 512 total aligned reads displayed.
GATTTTGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTGGCGGC > CP009273/2901289‑2901423 | ttttGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:6056045‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:24548568‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:6472113‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:20489171‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:16856743‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:24858804‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:2822629‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:35044277‑M2/1‑66 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:9675935‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:21283577‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:24206755‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:13382015‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:34647567‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGAGTACCCAgggtac < 1:36366042‑M2/67‑7 (MQ=255) cATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacg > 1:3846610‑M2/1‑60 (MQ=255) aTTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcg > 1:2162342‑M2/1‑59 (MQ=255) aTTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcg > 1:16670773‑M2/1‑59 (MQ=255) tAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgtt > 1:26840903‑M2/1‑57 (MQ=255) tAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgtt > 1:33591750‑M2/1‑57 (MQ=255) aGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgtt < 1:29041664‑M2/67‑12 (MQ=255) aGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgtt < 1:30078372‑M2/67‑12 (MQ=255) ggTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgttg < 1:8600862‑M2/67‑13 (MQ=255) ttttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTGCCCtgggtgcgcggggttt > 1:18677024‑M1/1‑52 (MQ=255) ttttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgttgtt > 1:35514621‑M2/1‑53 (MQ=255) tttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCg < 1:26569192/67‑1 (MQ=255) tttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGc < 1:14287373/68‑1 (MQ=255) tttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGc < 1:27757884/68‑1 (MQ=255) ttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGct < 1:32557515/68‑1 (MQ=255) ttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGct < 1:15762850/68‑1 (MQ=255) ccTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGctct > 1:10412264/1‑68 (MQ=255) tCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTa > 1:26291226/1‑67 (MQ=255) aaGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACt < 1:9304100/68‑1 (MQ=255) aaGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACt < 1:11466152/68‑1 (MQ=255) aaGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACt < 1:18977771/68‑1 (MQ=255) aaGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACt < 1:31811343/68‑1 (MQ=255) aGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgttgtttgtctggagt > 1:34348242‑M2/1‑44 (MQ=255) aGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgttgtttgtctggagt > 1:16247374‑M2/1‑44 (MQ=255) aGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACtt > 1:353373/1‑68 (MQ=255) cACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACttt < 1:25999870/66‑1 (MQ=255) caagtTAAACAGAAACTCCAGACAAACAACGCGGACCCAgggtacgcgttgtttgtctggagtttcag > 1:6874312‑M2/3‑39 (MQ=255) aGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTtttct > 1:29295285/1‑68 (MQ=255) aGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttact > 1:32172161/1‑68 (MQ=255) aGTTAAACTGAAACACCAGACAAACAACGCGTACCCAgggtacgcgttgtttgtctggagtttcagtt > 1:18015469‑M2/1‑37 (MQ=255) gTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttactt > 1:18785969/1‑68 (MQ=255) tAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgttgtttgtctggagtttcagtttaa > 1:2764427‑M2/1‑34 (MQ=255) tAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttactta < 1:1206520/67‑1 (MQ=255) aCTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:19494335/1‑68 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:14183169/1‑67 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:20091465/1‑67 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:36772368/1‑67 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCg < 1:26740041/68‑1 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAAATTTTAttcttactac > 1:12615956/1‑65 (MQ=38) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCAAACTTTTATTCTTACTTc > 1:25142574/1‑67 (MQ=38) tGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCg > 1:4615171/1‑67 (MQ=255) aaCTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTg > 1:1178490/1‑68 (MQ=255) aCTCCAGACAAACAACGCGTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgact > 1:8793026‑M1/1‑24 (MQ=255) cTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGAc < 1:30228984/68‑1 (MQ=255) tCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACg < 1:22243836/68‑1 (MQ=255) tCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACg < 1:7971857/68‑1 (MQ=255) ccAGACAAACAACGCGTACCCTGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGt > 1:4140202/1‑68 (MQ=255) cAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGtt < 1:22880489/68‑1 (MQ=255) caaacaaCGCGTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaa > 1:32499082‑M1/1‑16 (MQ=255) caaacaaCGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGttt < 1:31433723/65‑1 (MQ=255) caaacaaCGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGATTATg > 1:13606098/1‑68 (MQ=255) aacaacGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGa > 1:13831643/1‑68 (MQ=255) aacGCGTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaaccta > 1:20965561‑M1/1‑11 (MQ=255) aacGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAAc > 1:18216778/1‑67 (MQ=255) aacGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAAc > 1:30546028/1‑67 (MQ=255) cgcgTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaat > 1:11172283‑M1/1‑9 (MQ=255) cgcgTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaat > 1:30973544‑M1/1‑9 (MQ=255) cgcgTACCCGgggtacgcgttgtttgtctggagtttcagtttaacgagtgacttgaggaaaacctaat < 1:34272866‑M2/68‑59 (MQ=255) cgcgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:32849277/1‑67 (MQ=255) cgTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatg > 1:10362702‑M1/1‑7 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:14642267/1‑65 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:7460114/1‑65 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:25519128/1‑65 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:19743526/1‑65 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:539040/1‑65 (MQ=255) gTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgt < 1:17773616‑M1/67‑62 (MQ=255) gTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgt < 1:25399878‑M1/67‑62 (MQ=255) gTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgt < 1:13024231‑M1/67‑62 (MQ=255) gTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgt < 1:11245047‑M1/67‑62 (MQ=255) gTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgt > 1:27118088‑M1/1‑6 (MQ=255) gTACCCtgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgt < 1:19883537‑M1/67‑62 (MQ=255) aCCCtgggtacgtgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacct < 1:29674828‑M1/60‑57 (MQ=255) ccctgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgtccaa > 1:23705149‑M1/1‑3 (MQ=255) ccctgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgtccaa > 1:21096671‑M1/1‑3 (MQ=255) ccctgggtacgcgttgtttgaatggattttcagtttaactactgacttgacgacaacctaatgtccaa > 1:33305305‑M1/1‑3 (MQ=255) cccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:15656105/1‑68 (MQ=255) cctgggtacgcgttgtttgtctggggtttcagtttaactagtgacttgaggaaaacctaatgtccaaa > 1:35887352‑M1/1‑2 (MQ=255) cctgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgtccaaa > 1:194096‑M1/1‑2 (MQ=255) cctgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgtccaaa > 1:31542718‑M1/1‑2 (MQ=255) cctgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgtccaaa > 1:8481123‑M1/1‑2 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:10063080/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:5891/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:27328923/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:21906799/1‑67 (MQ=255) ctgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgtccaaaa > 1:17218770‑M1/1‑1 (MQ=255) ctgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgtccaaaa > 1:22557104‑M1/1‑1 (MQ=255) ctgggtacgcgttgtttgtctggagtttcagtttaactagtgacttgaggaaaacctaatgtccaaaa > 1:10750386‑M1/1‑1 (MQ=255) | GATTTTGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTGGCGGC > CP009273/2901289‑2901423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |