| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2901356 | 229 (0.510) | 18 (0.050) | 9/88 | NT | 8.4% | intergenic (‑56/+32) | eno/pyrG | enolase/CTP synthetase |
| ? | CP009273 | = 2901357 | 213 (0.610) | intergenic (‑57/+31) | eno/pyrG | enolase/CTP synthetase | |||||
Only 100 of 394 total aligned reads displayed.
ATTTTGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTGGCGGCT > CP009273/2901290‑2901424 | aTTTTGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCa > 1:1038957/1‑68 (MQ=255) ttttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAg > 1:22557104‑M2/1‑67 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:10307128‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:3016911‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:29070930‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:21964179‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:18731774‑M2/1‑66 (MQ=255) tttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgg > 1:15700771‑M2/1‑66 (MQ=255) ttGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAggg > 1:23705149‑M2/1‑65 (MQ=255) ttGGACATTAGGTTGTCGTCAAGTCAGTAGTTAAACTGAAAATCCATTCAAACAACGCGTACCCAggg > 1:33305305‑M2/1‑65 (MQ=255) tGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggt > 1:32533085‑M2/1‑64 (MQ=255) aCATTAGGTTTTCCTCGAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:26243263‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:24247013‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:11245047‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:13382015‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:16815463‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:21283577‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtac < 1:25468871‑M2/67‑7 (MQ=255) aCATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGAGTACCCAgggtac < 1:36366042‑M2/67‑7 (MQ=255) cATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacg > 1:31586849‑M2/1‑60 (MQ=255) aTTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcg > 1:11172283‑M2/1‑59 (MQ=255) aGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGAGAAACAACGCGTACCCAgggtacgcgtt < 1:34837795‑M2/67‑12 (MQ=255) aGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAgggtacgcgtt < 1:30880174‑M2/67‑12 (MQ=255) aGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACACGTACCCAgggt < 1:29674828‑M2/60‑5 (MQ=255) ttttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGcc > 1:24999049/1‑67 (MQ=255) tttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCg < 1:26569192/67‑1 (MQ=255) tttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGc < 1:17468927/68‑1 (MQ=255) tttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGc < 1:12575686/68‑1 (MQ=255) tttCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGc < 1:6623873/68‑1 (MQ=255) ccTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGctct < 1:11499008/68‑1 (MQ=255) cTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTa > 1:24750226/1‑68 (MQ=255) cTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTACCGCTCTa > 1:34628014/1‑68 (MQ=255) tCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCCGGGTACGCGTTGCCGCTCTaa < 1:34275106/68‑1 (MQ=255) taGTCACTACTTAAACTGAATCTCCAGACTAACAACGCTTACCCAGGGTACGCGTTGCCGCTCTAACt < 1:27199155/67‑1 (MQ=38) aaGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACt < 1:18977771/68‑1 (MQ=255) aaGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACt < 1:6982908/68‑1 (MQ=255) aGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACtt > 1:27462448/1‑68 (MQ=255) aGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACtt > 1:20144187/1‑68 (MQ=255) aGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACtt > 1:13005152/1‑68 (MQ=255) gTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACttt > 1:9016904/1‑68 (MQ=255) tCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACtttt > 1:3104819/1‑68 (MQ=255) tCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACtttt > 1:2226050/1‑68 (MQ=255) tCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACtttt > 1:32302045/1‑68 (MQ=255) tCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACtttt > 1:37080312/1‑68 (MQ=255) cTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAcggtacgcgttgtttgtctggagtttcag > 1:979431‑M2/1‑39 (MQ=255) aGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttact > 1:27721187/1‑68 (MQ=255) aGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttact > 1:20727259/1‑68 (MQ=255) aGTTAAACTGAAACTCCAGACAAACAACGCCTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttact > 1:8668471/1‑68 (MQ=255) gTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttactt > 1:32907461/1‑68 (MQ=255) ttAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttactt > 1:10627099/1‑67 (MQ=255) ttAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttactt > 1:33838763/1‑67 (MQ=255) ttAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTttactt > 1:19331983/1‑67 (MQ=255) aaCTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTtacttact > 1:32710898/1‑67 (MQ=255) aaCTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTtacttact > 1:35425555/1‑67 (MQ=255) aCTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:19494335/1‑68 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:4390170/1‑67 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:14262389/1‑67 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:14183169/1‑67 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:20091465/1‑67 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTc > 1:29355239/1‑67 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCg < 1:17156628/68‑1 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCg < 1:393695/68‑1 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCg < 1:26740041/68‑1 (MQ=255) cTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCACTAACTTTTTTACTTACTTc > 1:16097623/1‑67 (MQ=255) aCTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTg > 1:7806941/1‑67 (MQ=255) tCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTTACGTTTTTACTTACTGCGCCTGACg > 1:25736340/1‑68 (MQ=38) tCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACg > 1:36639974/1‑68 (MQ=255) tCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACg < 1:18558073/68‑1 (MQ=255) tCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACg > 1:8012614/1‑68 (MQ=255) tCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACg < 1:936616/68‑1 (MQ=255) cAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGtt < 1:22880489/68‑1 (MQ=255) cAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGtt < 1:6067609/68‑1 (MQ=255) acaaacaaCGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACg < 1:35692275/63‑1 (MQ=255) caaacaaCGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTg > 1:2530806/1‑68 (MQ=255) aacaacGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGa > 1:13831643/1‑68 (MQ=255) aacaacGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGa > 1:28295802/1‑68 (MQ=255) aacaacGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGa > 1:16309127/1‑68 (MQ=255) aacGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAAc > 1:19876122/1‑67 (MQ=255) aacGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAAc > 1:12185688/1‑67 (MQ=255) cgcgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:35214700/1‑67 (MQ=255) cgcgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCg < 1:21723208/68‑1 (MQ=255) gcgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGc < 1:4721251/68‑1 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:19743526/1‑65 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:15243417/1‑65 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:14642267/1‑65 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:21006532/1‑65 (MQ=255) cgTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTc > 1:539040/1‑65 (MQ=255) cccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:31441573/1‑68 (MQ=255) cccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:32037990/1‑68 (MQ=255) ccAGGGTACGCGTTGGCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:13630184/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcgg < 1:11816934/68‑1 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:27046822/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:5891/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:10063080/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:27896266/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:8492129/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:30491853/1‑67 (MQ=255) ccAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:18136937/1‑67 (MQ=255) cAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:2632959/1‑66 (MQ=255) cAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTggcg > 1:17913215/1‑66 (MQ=255) | ATTTTGGACATTAGGTTTTCCTCAAGTCACTAGTTAAACTGAAACTCCAGACAAACAACGCGTACCCAGGGTACGCGTTGCCGCTCTAACTTTTTTACTTACTTCGCCTGACGTTTCTGGAACTCGCTGGCGGCT > CP009273/2901290‑2901424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |