| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 10 (0.030) | 8/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 534 total aligned reads displayed.
CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 | ccGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAAATGCGGTTGGTACGGTAACGGCGAg < 1:18543578/68‑1 (MQ=255) gaagcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGc > 1:6273827‑M1/67‑68 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:28630523/68‑1 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:22241930/68‑1 (MQ=255) ttACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCgg < 1:14659171/68‑1 (MQ=255) ttACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCgg < 1:27401557/68‑1 (MQ=255) ttACAAACAGATTTGCATATCGACGGCAATTTACAGCAATTGCTGTTGGTACGGTAACGGCGAGCCg < 1:25140139/67‑1 (MQ=255) gcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCgg < 1:6555228‑M1/5‑1 (MQ=255) aacgcttgaggatattgtagagcttttccataccgcctggtaaatgcgctgatgtgataatGCCGGa > 1:35339722‑M1/62‑67 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCgg > 1:15797701‑M1/62‑66 (MQ=255) aaCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg < 1:15237618/68‑1 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgc < 1:24589045/68‑1 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:5623174/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:7590446/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:27760030/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:23195643/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:11190373/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:29671177/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcc > 1:14448382/1‑66 (MQ=255) cGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACCGCGAGCCGGATAcgccg < 1:34868293/68‑1 (MQ=255) tGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAc < 1:8374514/68‑1 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcg < 1:14894412/68‑1 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcg < 1:3322320/68‑1 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgt < 1:19504475/67‑1 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgt < 1:576724/67‑1 (MQ=255) atCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcgt < 1:11589041/68‑1 (MQ=255) atCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcgt > 1:796374/1‑68 (MQ=255) atCGACGGCAATTTACAGCAATTGCGGGTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcgt < 1:32315718/68‑1 (MQ=255) tCGACGGCAATTTACAGCAATTGCGGTTGGTACGGGAACGGCGAGCCGGATACGCCGCAAACGTCGTa < 1:10978533/68‑1 (MQ=255) cGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTa > 1:8749837/1‑67 (MQ=255) cAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGc < 1:9171649/67‑1 (MQ=255) cAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGc < 1:25621778/67‑1 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCa < 1:21294245/67‑1 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCAt < 1:5306042/68‑1 (MQ=255) aTTTACTGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCAtt < 1:17199213/68‑1 (MQ=255) aTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCAtt < 1:19189154/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:35662787/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:13340251/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:13458922/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:7324116/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:16671073/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:30596213/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:2257589/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:18807283/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:18016270/68‑1 (MQ=255) tttACAGCAATTGCGGTCGGTACGGTAACGGCGAGCCCGATACGCCGCAAACGTCGTATCCGGCATTa < 1:36015588/68‑1 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATc > 1:6003770/1‑67 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACCCCCCAAAAGTGGTATACCGCCTTAtaa > 1:263848/1‑66 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGAAACGCCGCAAACGTCGTATCCGGCATTATc > 1:34142521/1‑67 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACAt > 1:3909332/1‑68 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATAACAt > 1:30427073/1‑68 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:35870482/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:17724854/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:4362772/68‑1 (MQ=255) gCGGTTGGAACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:29888437/68‑1 (MQ=255) cGGTTGGTACGGTAACGGCGAGCCCGATAAACACCAAACGTAGTAAACCGCAATAACACATAAGAGCa > 1:23324230/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCa < 1:16967376/67‑1 (MQ=255) ttGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCCGCGCAtt < 1:10715154/67‑1 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt < 1:29208944/67‑1 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt < 1:5046794/67‑1 (MQ=255) ggTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTAc < 1:36365362/68‑1 (MQ=255) tACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATACGGCATTATCACATGAGCGCAATTAACA > 1:23713536‑M1/1‑68 (MQ=255) aCGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATACGGCATTATAACATCAGCGCATTTAACAG > 1:1212714‑M1/1‑68 (MQ=255) tgtgataatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCgg < 1:30202961‑M1/59‑1 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCG < 1:8215725‑M1/67‑1 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACCTCGTATCCGGCATTATCACATAAGCGCATTTACCAGGCGG > 1:31642969‑M1/1‑68 (MQ=255) aaCGGCGAGTCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:15113383/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCCAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGg > 1:21849311‑M1/1‑67 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGGATTATCACATCAGCGCATTTACCAGGCGGt < 1:28849281/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCCGGCGGg > 1:17538449‑M1/1‑67 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:28163174/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:7198600/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:18252793/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:19917633/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:4186781/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:3675205/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:21521491/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:22993009/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:30749656/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:2424574/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:26991155/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:24962231/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:32474030/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:33635449/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:32898777/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATACGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:34680596/1‑68 (MQ=255) ggCGAGCCGGCTTCGCCGCAAACGTCGTTTCCGGCATTTTCACATCAGCGCATTTTCCAGGCGGTATg > 1:12538057/1‑68 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTTTCCGGCATTATCCCCTCAGCGCATTTACCAGGCGGTATg > 1:36254109/1‑68 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:13861222/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg > 1:12919670/1‑68 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:2096470/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:10030520/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATAACATCAGCGCATTTACCAGGCGGTATg > 1:25971033/1‑68 (MQ=255) ggCGAGCCCGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg > 1:29559284/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATGCGGCATTATCACATCAGCGCATTTTCCAGGCGGGATGGt > 1:20072000/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:1136379/67‑1 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCCGCATTTTAACATCAGCGCATTTACCAGGCGGTATGGt > 1:31323114/1‑68 (MQ=255) cGAGCCCGATACGCCGCAAACCGGGTATCCGGCGTTATCACATCAGCGGATTTAACAGGCGGGATggg > 1:16343857/1‑67 (MQ=255) gAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGt < 1:6832286/67‑1 (MQ=255) GCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTaaa < 1:20705791‑M1/68‑1 (MQ=255) | CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |