| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 10 (0.030) | 8/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 602 total aligned reads displayed.
AATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTCAC > CP009273/2925140‑2925273 | tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:29586505/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:13340251/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:13458922/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:17767694/68‑1 (MQ=255) tttACAGCAATTGCGGTCGGTACGGTAACGGCGAGCCCGATACGCCGCAAACGTCGTATCCGGCATTa < 1:36015588/68‑1 (MQ=255) tACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATc < 1:19779419/68‑1 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCCAACGTCGTATCCGGCAatata > 1:26356826/1‑66 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAAAGTCGTATCCCGCATTAta > 1:30658433/1‑66 (MQ=255) ccgcctggtaaatgcgctgatgtgataatgccggatacgacgtttgcggcgtatccggcATTATcaca < 1:30202961‑M2/9‑1 (MQ=255) ccgcctggtaaatgcgctgatgtgaaaatgccggatacgacgtttgcggcgtatccggcATTATcaca < 1:4231390‑M2/9‑1 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcaca > 1:5323706/1‑67 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATAACAt > 1:30427073/1‑68 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACCCCGCAAACGTCGTATACGGCATTATAACAt > 1:72037/1‑68 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCCGCTACGCCCCAAACGTCGTTTACGGGATTTTccca > 1:1849630/1‑67 (MQ=255) gcctggtaaatgcgctgatgtgataatgccggatacgacgtttgcggcgtatccggcATTATCACATc < 1:36338026‑M2/11‑1 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcaca < 1:27636605/65‑1 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATAAGCCGCAAACGTCGTTACCGGCATTATAACATCa > 1:34808050/1‑68 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:28184781/68‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:22285390/68‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:35417449/68‑1 (MQ=255) ggtaaatgcgctgatgtgataatgccggatacgacgtttgcggcgtatccggcATTATCACATCAgcg < 1:25818572‑M2/15‑1 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATAACATCAGCGCAt > 1:20877297/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACCCCGCCAACGGCGTATACGGGATTATCACATCAgcgcct > 1:32942077/1‑66 (MQ=255) ttGGTACGGTAACGGCGAGCCGGATAAGCCCCAAACGTAGTATACCGGATTATAAAATCAGAGCAttt > 1:5891713/1‑68 (MQ=255) aCGGTAACGGCGAGCCCGATAAGCCGCAAACGTCGTATCCGGCAGTATCACATCAGCGCATTTACCAG > 1:18763321‑M1/1‑68 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCG < 1:25107864‑M1/67‑1 (MQ=255) tAACGGCGAGCCGGATACCCCGCAAACGTCGTATACGGCATTATAACATCAGCGCATTTAACAGGCgg > 1:27141162/1‑68 (MQ=255) aaCGGCGAGCCGTATACGCAGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:36850990/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGGATTATCACATCAGCGCATTTACCAGGCGGt < 1:28849281/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCCGGCGGg > 1:17538449‑M1/1‑67 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:29063465/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:1521096/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:31548345/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:3104920/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:14733350/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:33965200/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:23284040/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:2306663/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:36604477/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:21624750/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:21521491/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:35732877/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:18054776/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:7698111/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:26782207/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:19963655/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:12556300/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:10030520/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:13861222/68‑1 (MQ=255) taatGCCGGATACGCCGCAAACGTCGTTTCCGGCATTATCACATCAGCGCATTTACCGGGCGGTATgg < 1:16844324‑M1/64‑1 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATGCGGCATTATCACATCAGCGCATTTTCCAGGCGGGATGGt > 1:20072000/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:1136379/67‑1 (MQ=255) atGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTa < 1:22050280‑M1/66‑1 (MQ=255) GCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTaaa < 1:3990592‑M1/68‑1 (MQ=255) CGGATACGCGGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:8595313‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:32523687‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:34328298‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:4747914‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:6862628‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:8126332‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:10802127‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:25619597‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:11104545‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:11715049‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:15708052‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:16391107‑M1/1‑68 (MQ=255) CGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGc > 1:21149773‑M1/1‑68 (MQ=255) ATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct < 1:7943716‑M1/68‑1 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:3621787‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:2846928‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:3315403‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:20534492‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:17056749‑M1/1‑67 (MQ=255) TACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGctct > 1:19095613‑M1/1‑67 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCCGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc < 1:35002621‑M1/68‑1 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc > 1:4424707‑M1/1‑68 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc < 1:17706349‑M1/68‑1 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc < 1:9252578‑M1/68‑1 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc < 1:8844086‑M1/68‑1 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc > 1:21369149‑M1/1‑68 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc > 1:2475970‑M1/1‑68 (MQ=255) ACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTAc > 1:24211688‑M1/1‑68 (MQ=255) gccgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGcactggatgatgtttgta < 1:13047573‑M1/68‑19 (MQ=255) ccgcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAat > 1:22681208/1‑68 (MQ=255) gcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAatat < 1:29981614/68‑1 (MQ=255) gcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAatat < 1:24380296/68‑1 (MQ=255) gcAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAatat < 1:33622957/68‑1 (MQ=255) aaaCGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAatat > 1:29349043/1‑66 (MQ=255) cgtcgtATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCa > 1:16216062/1‑68 (MQ=255) cgtcgtATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCa > 1:19301199/1‑68 (MQ=255) gtcgtATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCaa < 1:14413293/68‑1 (MQ=255) tcgtATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCaa > 1:6586064/1‑67 (MQ=255) tatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGt > 1:12063636‑M2/9‑68 (MQ=255) atccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGt < 1:23624613‑M2/60‑1 (MQ=255) tccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGtt > 1:15024844‑M2/7‑67 (MQ=255) ccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGtt > 1:22833733‑M2/6‑66 (MQ=255) ccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGc < 1:7355355‑M2/63‑1 (MQ=255) gcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTc > 1:6273827‑M2/3‑68 (MQ=255) gcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCAACAATATCCTCAAGCGTTGCTTc > 1:3225971‑M2/3‑68 (MQ=255) cATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTc < 1:5626778‑M2/66‑1 (MQ=255) | AATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTCAC > CP009273/2925140‑2925273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |