| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3423234 = | 454 (1.020) | 17 (0.050) | 8/90 | NT | 5.2% | coding (149/258 nt) | yrdB | DUF1488 family protein |
| ? | CP009273 | 3423267 = | 259 (0.720) | coding (116/258 nt) | yrdB | DUF1488 family protein | |||||
Only 100 of 626 total aligned reads displayed.
CTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACC > CP009273/3423167‑3423301 | aaaaatgtgtatgttttcccgctctcgtgaatggtatgcaactgacatgcgcgatctctggcgagagt > 1:10516435‑M1/68‑68 (MQ=255) aatgtgtatgttttcccgctctcgtgaatggtatgcaactgacatgcgcgatctctggcgagagTCTg < 1:20698163‑M1/4‑1 (MQ=255) atgtgtatgttttcccgctctcgtgaatggtatgcaactgacatgcgcgatctctggcgagagTCTgg > 1:1206566‑M1/64‑68 (MQ=255) aTTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTgg < 1:19787576/68‑1 (MQ=255) aTTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTgg < 1:30384404/68‑1 (MQ=255) aTTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTgg < 1:24844283/68‑1 (MQ=255) aTTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTgg < 1:13731/68‑1 (MQ=255) aTTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTgg < 1:3588758/68‑1 (MQ=255) aTTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTgg < 1:7547350/68‑1 (MQ=255) tgtgtatgttttcccgctctcgtgaatggtatgcaactgacatgcgcgatctctggcgagagTCTGGc > 1:2408662‑M1/63‑68 (MQ=255) tgtgtatgttttcccgctctcgtgaatggtatgcaactgacatgcgcgatctctggcgagagTCTGGc > 1:3005030‑M1/63‑68 (MQ=255) tgcgtatgttttcccgctctcgtgaatggtatgcaactgacatgcgcgatctctggcgagagTCTGGc < 1:20986296‑M1/6‑1 (MQ=255) tAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCg > 1:21428394/1‑68 (MQ=255) aGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTa < 1:25530351/68‑1 (MQ=255) atgttttcccgctctcgtgaatggtatgcaactgacatgcgcgatctctggcgagagTCTGGCGTAtc > 1:20181139‑M1/58‑68 (MQ=255) atgttttcccgctctcgtgaatggtatgcaactgacatgcgcgatctctggcgagagTCTGGCGTAtc > 1:8904820‑M1/58‑68 (MQ=255) tttCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTAtct < 1:36605268/68‑1 (MQ=255) tttCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTAtct < 1:14959090/68‑1 (MQ=255) tttCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTAtc > 1:11749996/1‑67 (MQ=255) tttCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTAt < 1:31595765/66‑1 (MQ=255) tttCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTAt < 1:14753433/66‑1 (MQ=255) tttCCGCTTCTTCTTCCAGGTCCCAGCGAAGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTAtct < 1:33546848/68‑1 (MQ=255) gttttcccgctctcgtgaatggtatgcaactgacatgcgcgatctctggcgagagTCTGGCGTAtc < 1:34825033‑M1/11‑1 (MQ=255) tCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTcc < 1:9535840/68‑1 (MQ=255) ccGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCa < 1:15537012/68‑1 (MQ=255) tcttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTaaa > 1:32709641/1‑68 (MQ=255) cttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAg < 1:396849/68‑1 (MQ=255) ttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGc < 1:7842222/68‑1 (MQ=255) tcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCg < 1:25201479/68‑1 (MQ=255) tcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCg < 1:2645555/68‑1 (MQ=255) tcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCg < 1:1818812/68‑1 (MQ=255) acttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCg < 1:12681346/67‑1 (MQ=255) ttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGAt < 1:14002132/68‑1 (MQ=255) tcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGAt > 1:17847266/1‑67 (MQ=255) ccAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATAc < 1:7170073/68‑1 (MQ=255) ccAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATAc > 1:18889813/1‑68 (MQ=255) ccAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATAc > 1:31109427/1‑68 (MQ=255) ccAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATAc < 1:11222412/68‑1 (MQ=255) ccAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATAc < 1:35227476/68‑1 (MQ=255) ccAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATAc > 1:36347192/1‑68 (MQ=255) ccAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATAc > 1:591687/1‑68 (MQ=255) cAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACg < 1:5526621/68‑1 (MQ=255) cAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACg < 1:16199791/68‑1 (MQ=255) cAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACg < 1:3560188/68‑1 (MQ=255) cAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACg < 1:3716408/68‑1 (MQ=255) cAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACg < 1:18480818/68‑1 (MQ=255) cAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCAGGCGTATCTCCAGTAAAGCGATACg < 1:27019919/68‑1 (MQ=255) ggTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGcc > 1:4745602/1‑68 (MQ=255) tCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAg > 1:26733798/1‑68 (MQ=255) tCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAg > 1:6865148/1‑68 (MQ=255) tCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAg > 1:4323528/1‑68 (MQ=255) cccAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGa < 1:26059704/68‑1 (MQ=255) cccAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGa < 1:15946849/68‑1 (MQ=255) aGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCg > 1:16932676/1‑55 (MQ=255) gCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGActc > 1:2376387/1‑67 (MQ=255) gCGATGCTGACGAAAACTCGCTAACCACTGTTCTGCCGTATCACCAGTAAAGCGATACGCCAGAc > 1:10945812/1‑65 (MQ=255) cGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACtctc > 1:21974990/1‑68 (MQ=255) gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGActc < 1:10043131/65‑1 (MQ=255) gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGActc < 1:31331809/65‑1 (MQ=255) gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACtctc < 1:6586764/67‑1 (MQ=255) gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCg < 1:13418925/68‑1 (MQ=255) actgacatgcgcgatctctggcgagcgTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGcc < 1:23245290‑M1/41‑1 (MQ=255) cTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCag > 1:1220534/1‑68 (MQ=255) tGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCaga < 1:12931978/68‑1 (MQ=255) cGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAgaga > 1:33110529/1‑67 (MQ=255) cGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAgaga < 1:10243401/67‑1 (MQ=255) aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATcgc < 1:14598061/68‑1 (MQ=255) aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATcgc < 1:28677974/68‑1 (MQ=255) aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATcgc < 1:15805176/68‑1 (MQ=255) aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATcgc < 1:27503001/68‑1 (MQ=255) aCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCTGAGATCgcgc > 1:8722940/1‑68 (MQ=255) cGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATg < 1:33844892/68‑1 (MQ=255) cGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATg < 1:22828228/68‑1 (MQ=255) cGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATg < 1:4035278/68‑1 (MQ=255) tAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCa < 1:17406192/68‑1 (MQ=255) tAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCa < 1:5777176/68‑1 (MQ=255) tAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCa < 1:29200572/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:36908155/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:7681336/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:16764495/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:8218798/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:25747540/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:28059005/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:29571613/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:34655656/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:34319677/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt > 1:14164289/1‑68 (MQ=255) cgagagTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGtt < 1:32057682‑M1/61‑1 (MQ=255) cACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGtt > 1:11527658/1‑67 (MQ=255) cACTGTTCTGGCGTATCACCCGT‑TAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGc < 1:34186454/68‑1 (MQ=255) tGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCAt < 1:5270008/68‑1 (MQ=255) cttCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGc < 1:3068121/64‑1 (MQ=255) gTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATa < 1:12521052‑M1/66‑1 (MQ=255) tCTGGCGTATCTCCAGTACAGCGATACGCCAGACCCTCGCCAGAGATCGCGCACGTCAGTTGCATAcc < 1:36106234/68‑1 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc > 1:323261‑M1/1‑68 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc < 1:15156142‑M1/68‑1 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc < 1:24434901‑M1/68‑1 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc > 1:22287919‑M1/1‑68 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc < 1:19355487‑M1/68‑1 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAc > 1:24743974‑M1/1‑67 (MQ=255) | CTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACC > CP009273/3423167‑3423301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |