| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3423234 = | 454 (1.020) | 17 (0.050) | 8/90 | NT | 5.2% | coding (149/258 nt) | yrdB | DUF1488 family protein |
| ? | CP009273 | 3423267 = | 259 (0.720) | coding (116/258 nt) | yrdB | DUF1488 family protein | |||||
Only 100 of 696 total aligned reads displayed.
CCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTT > CP009273/3423200‑3423334 | gCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGActc > 1:35639333/1‑67 (MQ=255) gCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGActc > 1:18517494/1‑67 (MQ=255) gCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGActc > 1:31866732/1‑67 (MQ=255) gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGActc < 1:10043131/65‑1 (MQ=255) gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACtctc > 1:5827111/1‑67 (MQ=255) gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACtctc < 1:3981373/67‑1 (MQ=255) gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCg < 1:7247591/68‑1 (MQ=255) gATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCg < 1:18038933/68‑1 (MQ=255) tGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGcc < 1:15348803/68‑1 (MQ=255) gCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCa > 1:6283567/1‑68 (MQ=255) cTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCag > 1:1220534/1‑68 (MQ=255) tGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCaga < 1:5358457/68‑1 (MQ=255) gACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCagag < 1:10398598/68‑1 (MQ=255) cGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACTCCAGACTCTCGCCAgaga > 1:495072/1‑67 (MQ=255) aaaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATc > 1:24865739/1‑67 (MQ=255) aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATcgc < 1:26013519/68‑1 (MQ=255) aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATcgc < 1:10650620/68‑1 (MQ=255) aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATcgc < 1:28677974/68‑1 (MQ=255) aCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCgcgc > 1:27572214/1‑68 (MQ=255) cTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCa < 1:14007597/68‑1 (MQ=255) cGCTAACCACTGTTCTGGCGGATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATg < 1:1101961/68‑1 (MQ=255) tAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCa < 1:24419618/68‑1 (MQ=255) tAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCa < 1:20324162/68‑1 (MQ=255) tAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCa < 1:2460260/68‑1 (MQ=255) tAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCa < 1:6911300/68‑1 (MQ=255) ggcgcgagtctggcgtatcgcttaactgcacaaccgccagaCTCTCGCCAGAGATCGCGCATGTCAGt < 1:26495642‑M2/27‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACTCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:36192741/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:17351803/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:7978199/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:25747540/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:1423315/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:31271608/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:15945428/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:34319677/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:19241936/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:36476261/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:35084739/68‑1 (MQ=255) aCCACTGTTCTGGCGTATCTCAATTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:37165381/68‑1 (MQ=255) aCCACTGATCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGt < 1:13732645/68‑1 (MQ=255) gcgagagcctgccttatcgctttactgcacatacgccagaCGCTCGCCAGAGATCGCGCATGTCAGt < 1:17610101‑M2/27‑1 (MQ=255) cACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGtt > 1:2919171/1‑67 (MQ=255) aCTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGc > 1:4247204/1‑68 (MQ=255) aCTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGc < 1:9882532/68‑1 (MQ=255) aCTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGc < 1:11643257/68‑1 (MQ=255) aCTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGc < 1:15075520/68‑1 (MQ=255) tGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCAt < 1:12034340/68‑1 (MQ=255) tGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCAt < 1:30401345/68‑1 (MQ=255) gTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATCTCAGTTGCAt > 1:13324135/1‑67 (MQ=255) gTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATa < 1:12521052‑M1/66‑1 (MQ=255) TCTGGCGTATCTCCAGTAAAGCTATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc < 1:23743572‑M1/68‑1 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc < 1:23960617‑M1/68‑1 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc > 1:34557512‑M1/1‑68 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc < 1:32627797‑M1/68‑1 (MQ=255) TCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATAcc > 1:22999274‑M1/1‑68 (MQ=255) tgccgtatcgctttactggagaaaccccagaCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCAt < 1:34152402‑M2/37‑1 (MQ=255) TGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCAt > 1:21970532‑M1/1‑68 (MQ=255) GGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCAt < 1:22682499‑M1/67‑1 (MQ=255) GGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCAt < 1:25511883‑M1/67‑1 (MQ=255) CGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCCTTc < 1:8802904‑M1/67‑1 (MQ=255) CGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTc < 1:25401080‑M1/67‑1 (MQ=255) CGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTc < 1:33744405‑M1/67‑1 (MQ=255) CGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTc < 1:36978797‑M1/67‑1 (MQ=255) CGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTc < 1:19946106‑M1/67‑1 (MQ=255) CGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTc < 1:251586‑M1/67‑1 (MQ=255) CGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTc < 1:11409287‑M1/67‑1 (MQ=255) CGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTc < 1:7505136‑M1/67‑1 (MQ=255) CTCCAGTAAAGCGATACGCCGGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACgaga < 1:16786768‑M1/68‑1 (MQ=255) CTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACgaga < 1:6574790‑M1/68‑1 (MQ=255) CTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACgaga < 1:27273111‑M1/68‑1 (MQ=255) CTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACgaga > 1:16529034‑M1/1‑68 (MQ=255) tcCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGagag < 1:10232265/68‑1 (MQ=255) aGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCgg > 1:2225386/1‑68 (MQ=255) gTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCggg > 1:19439127/1‑68 (MQ=255) aaaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCggg < 1:15620777/66‑1 (MQ=255) aaaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCggg < 1:12882059/66‑1 (MQ=255) aaaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGaa > 1:36038638/1‑68 (MQ=255) aaaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGaa > 1:34808393/1‑68 (MQ=255) aaaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGaa > 1:26968037/1‑68 (MQ=255) aGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGaaaa < 1:36748156/68‑1 (MQ=255) aGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGaaaa < 1:29478486/68‑1 (MQ=255) aGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGaaa > 1:2804155/1‑67 (MQ=255) aGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGaaa > 1:32998892/1‑67 (MQ=255) aGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGaaa > 1:35311960/1‑67 (MQ=255) gatacgccagaCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAAc < 1:3348924‑M2/55‑1 (MQ=255) gatacgccagaCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAAc < 1:2992439‑M2/55‑1 (MQ=255) gatacgccagaCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACAt > 1:9341667‑M2/12‑68 (MQ=255) gatacgcaagaCTCTCGCCAGAGATCTCGCAAGTCAGTAGCATACCATTCACGAGAGCGCGAAAACAt > 1:8526319‑M2/12‑68 (MQ=255) gccagaCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATAcaca < 1:7686563‑M2/62‑1 (MQ=255) ccagaCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAt > 1:31532689‑M2/6‑68 (MQ=255) cagaCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAtt < 1:32201423‑M2/64‑1 (MQ=255) aCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAttttt > 1:30756018‑M2/2‑68 (MQ=255) aCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAttttt > 1:11137427‑M2/2‑68 (MQ=255) aCTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAttttt > 1:14627992‑M2/2‑68 (MQ=255) aCTCTCGCCAGAGATAGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAtattt > 1:21315725‑M2/2‑68 (MQ=255) ctctCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAtttttt > 1:5961074/1‑68 (MQ=255) ctctCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAtttttt > 1:24248334/1‑68 (MQ=255) ctctCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAtttttt > 1:20852306/1‑68 (MQ=255) ctctCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAtttttt > 1:5449614/1‑68 (MQ=255) ctctCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAttt < 1:16143608/65‑1 (MQ=255) ctctCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAttt < 1:16380044/65‑1 (MQ=255) | CCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTT > CP009273/3423200‑3423334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |