| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 772557 = | 124 (0.280) | 5 (0.010) | 4/98 | NT | 6.1% | coding (760/1266 nt) | tolA | membrane anchored protein in TolA‑TolQ‑TolR complex |
| ? | CP009273 | 772577 = | 45 (0.120) | coding (780/1266 nt) | tolA | membrane anchored protein in TolA‑TolQ‑TolR complex | |||||
Only 100 of 118 total aligned reads displayed.
GGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCAAAAGCTGCA > CP009273/772511‑772640 | ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTg < 1:10262529/68‑1 (MQ=255) cagcagAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGa < 1:26034721/67‑1 (MQ=255) agcagAGAAAGCTGCAGCCGACAAAAAAGCAGCAGTAAAAGCGGCTGCTGAAAAGGCAGCAGCTGAt < 1:28555803/67‑1 (MQ=255) agcagAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGAt < 1:28363474/67‑1 (MQ=255) agcagAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGAt < 1:36332277/67‑1 (MQ=255) agagAATGCTGCAGGCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:17927548/65‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:23995658/65‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:30761102/65‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAg < 1:33365029/67‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAg < 1:7950069/67‑1 (MQ=255) agaAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGaaa > 1:32924263/1‑68 (MQ=255) agaAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGaaa > 1:17102240/1‑68 (MQ=255) gaAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGa < 1:4243710/65‑1 (MQ=255) gaAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGa < 1:6160310/65‑1 (MQ=255) aaGCTGCAGCCGGCAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:34785112/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:36865823/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:29372943/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:29874419/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:30283006/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:30490207/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:35864035/1‑68 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGAGAAGAAagca > 1:20932775/1‑68 (MQ=255) agctgcagccGACAAAAAAGCAGCAGAAAAATCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:15117030‑M2/11‑67 (MQ=255) gctgccgccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:8128883‑M2/10‑68 (MQ=255) gctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:15911198‑M2/10‑68 (MQ=255) gctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:33939505‑M2/10‑68 (MQ=255) gctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:17419585‑M2/10‑68 (MQ=255) gctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:6645117‑M2/10‑68 (MQ=255) gctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:436904‑M2/10‑68 (MQ=255) gcggcggctttttctgccgctgctttcttatcagctgctgccttttcagcagcTGATAAGAAagcagc < 1:12859503‑M2/15‑1 (MQ=255) ctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:22766855‑M2/9‑68 (MQ=255) ctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:26977289‑M2/9‑68 (MQ=255) ctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:12071381‑M2/9‑68 (MQ=255) ctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:4116809‑M2/9‑68 (MQ=255) ctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:12937185‑M2/9‑68 (MQ=255) ctgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGAAGCAGCTGATAAGAAAGCAGCg > 1:10283905‑M2/9‑68 (MQ=255) tgcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCgg < 1:9428156‑M2/61‑1 (MQ=255) ggcggcttttgctgccgctgctttctaatcagctgctgccttttcaccagcTGATAAGAAAGCAGCgg < 1:24080311‑M2/17‑1 (MQ=255) gcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGc > 1:856060‑M2/7‑68 (MQ=255) gcagccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGc < 1:13816559‑M2/62‑1 (MQ=255) agccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAg > 1:11842414‑M2/5‑68 (MQ=255) gccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGa > 1:15150870‑M2/4‑68 (MQ=255) gccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGa > 1:14487927‑M2/4‑68 (MQ=255) gccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGa > 1:21388494‑M2/4‑68 (MQ=255) gccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGa > 1:12228833‑M2/4‑68 (MQ=255) ctttttctgccgctgctttcttatcaGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGa > 1:14818667‑M1/27‑67 (MQ=255) cGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAg < 1:20843402‑M2/64‑1 (MQ=255) tctgccgctgctttcttatcagctgctgccttttcagcagcTGATAAGAAAGCAGCGGCAGAAAAAg > 1:14818667‑M2/42‑67 (MQ=255) aaaaaGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAgcc > 1:12584236/1‑68 (MQ=255) aaaGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAgccgc < 1:25574402/68‑1 (MQ=255) aaaGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAgccgc < 1:17322032/68‑1 (MQ=255) ccgctgctttcttatcaGCTGGTGAAAAGGCAGCAGCTGATTAGAAAGCAGCGGCAGCAAAAgccgcc < 1:24080311‑M1/51‑1 (MQ=255) aaGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAgccgcc < 1:24683772/68‑1 (MQ=255) agcagcAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAgccgcc > 1:5465265/1‑67 (MQ=255) agcagcAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGccgccg < 1:34172196/68‑1 (MQ=255) gctgctttcttatcaGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCcgccgc < 1:12859503‑M1/53‑1 (MQ=255) gcagcaGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCcgccgc > 1:13944095/1‑68 (MQ=255) gcagcaGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCcgccgc > 1:13413357/1‑68 (MQ=255) agAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGa < 1:2772713/66‑1 (MQ=255) agAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGAc < 1:13103768/67‑1 (MQ=255) agAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGAc < 1:14077777/67‑1 (MQ=255) agAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGAc < 1:20997897/67‑1 (MQ=255) aaaaaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaa > 1:29256210/1‑68 (MQ=255) aaaaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaa < 1:29438571/66‑1 (MQ=255) aaaaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACa < 1:35058800/65‑1 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:7280146/1‑68 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:23620510/1‑68 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:23579876/1‑68 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:31057575/1‑68 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:23972444/1‑68 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:26582933/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:4623718/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:10181483/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:33205202/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:19687234/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:33249743/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:29389347/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:19134563/1‑68 (MQ=255) gctgctgccttttcagcagcTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcggc > 1:22062953‑M2/21‑68 (MQ=255) gctgctgccttttcagcagcTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcggc > 1:28934811‑M2/21‑68 (MQ=255) GCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcggc < 1:19394263‑M1/68‑1 (MQ=255) GCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcggc < 1:2133751‑M1/68‑1 (MQ=255) GCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcggc < 1:3371744‑M1/68‑1 (MQ=255) GCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcggc < 1:30418393‑M1/68‑1 (MQ=255) aGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:32877749/1‑68 (MQ=255) aGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:22500080/1‑68 (MQ=255) aGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:10452348/1‑68 (MQ=255) aGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:25291484/1‑68 (MQ=255) aGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:25312719/1‑68 (MQ=255) aGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:2835029/1‑68 (MQ=255) aGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:31904370/1‑68 (MQ=255) aGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:15295577/1‑68 (MQ=255) aGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:3992634/1‑68 (MQ=255) ggCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:6706038/1‑67 (MQ=255) ggCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:839653/1‑67 (MQ=255) ggCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:3615362/1‑67 (MQ=255) gcagcaGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCaaaa > 1:30404728/1‑66 (MQ=255) cagcagcTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCAAAAg < 1:27309126‑M2/59‑1 (MQ=255) gcTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCAAAAGCTGCa > 1:7679526‑M2/3‑66 (MQ=255) gcTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCAAAAGCTGCa > 1:1568687‑M2/3‑66 (MQ=255) | GGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCAAAAGCTGCA > CP009273/772511‑772640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |