| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 910549 = | 83 (0.190) | 6 (0.020) | 3/98 | NT | 7.7% | intergenic (‑236/+259) | ybjE/aqpZ | putative transporter/aquaporin Z |
| ? | CP009273 | 910582 = | 72 (0.180) | intergenic (‑269/+226) | ybjE/aqpZ | putative transporter/aquaporin Z | |||||
Only 100 of 384 total aligned reads displayed.
CCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGG > CP009273/910520‑910649 | ttatcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgcccGACCCGGTAGcc < 1:7165507‑M2/12‑1 (MQ=255) ttatcccttaccgctcccgggtcgggcgcgaggtaacatccctgtaaaacgcgcccGACCCGGTAGcc < 1:9460491‑M2/12‑1 (MQ=255) ATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGa < 1:2809945‑M2/64‑1 (MQ=255) ATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATaa < 1:27153177‑M2/67‑1 (MQ=255) tggGGGCGGAGGGCGCGGTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:28775094‑M2/65‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:21834147‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:7595353‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg < 1:22572595‑M2/67‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:2684612‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:3597409‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:15207024‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:29844775‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:28860893‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg < 1:14911126‑M2/67‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:21353079‑M2/68‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:33735754‑M2/68‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt > 1:35662518‑M2/1‑68 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:12776595‑M2/68‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:12497481‑M2/68‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:9801923‑M2/68‑1 (MQ=255) GTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTc > 1:26445866‑M2/1‑68 (MQ=255) GTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTc > 1:11788611‑M2/1‑68 (MQ=255) TGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:24320478‑M2/66‑1 (MQ=255) GGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCg < 1:26037332‑M2/67‑1 (MQ=255) GGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGa > 1:25925142‑M2/1‑68 (MQ=255) GGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAg > 1:19496875‑M2/1‑68 (MQ=255) GCTGCGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:6462086‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:1428094‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:10247491‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:9309906‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:7784275‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:5194‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:3927172‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:34980420‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:324434‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:30237399‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:14742436‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:15484545‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:25527799‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:23317162‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:18669729‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:18931784‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:21004141‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:20379164‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:19315354‑M2/1‑68 (MQ=255) TGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGc < 1:17980798‑M2/68‑1 (MQ=255) TGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGc > 1:11291603‑M2/1‑68 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTaa < 1:20110213‑M1/48‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:18373227‑M1/67‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:4621075‑M1/67‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:16142764‑M1/67‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:19860631‑M1/67‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:7071493‑M1/67‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:12892442‑M1/67‑1 (MQ=255) GCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc > 1:9222068‑M1/1‑66 (MQ=255) ttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAgcg > 1:16447586/1‑67 (MQ=35) tACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAgcggc < 1:4852421/68‑1 (MQ=35) tACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAgcggc < 1:13427372/68‑1 (MQ=35) aCAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAgcggcg > 1:14529908/1‑68 (MQ=35) aCAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAgcggcg < 1:24093081/68‑1 (MQ=35) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAt > 1:31722304/1‑68 (MQ=35) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAt > 1:22900552/1‑68 (MQ=35) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAt > 1:29464748/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:30736241/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:16846928/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:10586789/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:8857038/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:13098875/1‑68 (MQ=35) gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtttt > 1:21684266/1‑68 (MQ=35) gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtttt > 1:10034455/1‑68 (MQ=35) gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtttt > 1:6781136/1‑68 (MQ=35) gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAACGCGCAGCGGCGAtttt > 1:33482946/1‑68 (MQ=25) tGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGt > 1:13725357/1‑68 (MQ=35) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTc > 1:25708865/1‑67 (MQ=35) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTc > 1:2196876/1‑67 (MQ=35) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTc > 1:26156937/1‑67 (MQ=35) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCg > 1:6092025/1‑67 (MQ=35) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCg > 1:5913228/1‑67 (MQ=35) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCg > 1:292121/1‑67 (MQ=35) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCg > 1:34374430/1‑67 (MQ=35) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGc < 1:32947954/68‑1 (MQ=35) aCCTCGCGCCCGACCCGGTAGCCGGAAGGGATAAGTCGAGGGCACCGCGCAGCGGGGATTTTGTTCg > 1:8101086/1‑67 (MQ=11) ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGGGGCGATTTTGTTCGcc > 1:36844715/1‑68 (MQ=25) ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGcc > 1:25024914/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:4944712/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:19702820/1‑68 (MQ=35) tCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCag > 1:36516930/1‑68 (MQ=35) acgcgcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCag > 1:15664162‑M2/9‑68 (MQ=255) cgcgcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCaga < 1:36134626‑M2/61‑1 (MQ=255) cgcgcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCaga > 1:17351679‑M2/8‑68 (MQ=255) gcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGc < 1:21657963‑M2/63‑1 (MQ=255) gcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGc < 1:22208385‑M2/63‑1 (MQ=255) gcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGc < 1:34812041‑M2/63‑1 (MQ=255) cccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGccc > 1:27494875‑M2/4‑68 (MQ=255) cccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGccc > 1:26753463‑M2/4‑68 (MQ=255) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:7851859/68‑1 (MQ=35) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:33317513/68‑1 (MQ=35) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:24846277/68‑1 (MQ=35) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:4315317/68‑1 (MQ=35) gACCCGGTACCCCTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAATTTGTTCGCCAGAGCCCggg < 1:15928549/68‑1 (MQ=11) | CCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGG > CP009273/910520‑910649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |