| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1264549 = | NA (NA) | 10 (0.030) | 5/94 | NT | NA | intergenic (+74/+75) | kdsA/ldrA | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase/toxic polypeptide, small |
| ? | CP009273 | 1264575 = | NA (NA) | intergenic (+100/+49) | kdsA/ldrA | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase/toxic polypeptide, small | |||||
Only 100 of 448 total aligned reads displayed.
TCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCG > CP009273/1264508‑1264615 | tCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCg > 1:14321651/1‑68 (MQ=255) cTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCgg < 1:16464979/68‑1 (MQ=255) cTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCgg < 1:4706191/68‑1 (MQ=255) cTGCGTTAAGACTTTTTTCATGGGGGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCgg < 1:12057896/68‑1 (MQ=255) tGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGt < 1:10047101/68‑1 (MQ=255) tGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGt > 1:19681072/1‑68 (MQ=255) tGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGt < 1:31827957/68‑1 (MQ=255) tGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGt < 1:32221810/68‑1 (MQ=255) tGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGt > 1:6031378/1‑68 (MQ=255) gCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGtt > 1:9736059/1‑68 (MQ=255) gCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGtt > 1:15919651/1‑68 (MQ=255) gCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGtt > 1:6378868/1‑68 (MQ=255) gTTTAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTc > 1:29217210/1‑68 (MQ=255) gTTAATACTATTTGCATCGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGttt < 1:14484440/67‑1 (MQ=18) gTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTc > 1:26596674/1‑68 (MQ=255) gTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTc > 1:29046025/1‑68 (MQ=255) aaGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCgg > 1:2277585/1‑67 (MQ=255) aaGACTTTTTTCATGGGGGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCggg < 1:6567660/68‑1 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgc > 1:1155320/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgc > 1:10468188/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgc > 1:29584652/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgc > 1:31102278/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgc > 1:1308863/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgc > 1:17766991/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgc > 1:11285660/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgc > 1:4152048/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgc > 1:7496135/1‑67 (MQ=255) gACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCAGCGGCCGGTTTCGGgc > 1:17985131/1‑67 (MQ=255) aCTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgcgc > 1:32850516/1‑68 (MQ=255) aCTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgcgc > 1:14628741/1‑68 (MQ=255) cgtttttCATGGGCGCCGGATACAAAAAAGGCCGCAGGCTGGTAC‑CCCTGCGGCCGGTTTCGGgcgc < 1:25676910/65‑1 (MQ=18) cTTTTTTCCTGGGTGCCGTATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCa < 1:2117405/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGgcgc < 1:2183509/67‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCa < 1:31431161/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCa < 1:19359044/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCa < 1:8550442/68‑1 (MQ=255) cTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCa > 1:13442970/1‑68 (MQ=255) ttttttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCat < 1:24351953/68‑1 (MQ=255) ttttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCatat < 1:26329960/68‑1 (MQ=255) ttttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCatat < 1:9133837/68‑1 (MQ=255) ttttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCatat > 1:12406103/1‑68 (MQ=255) ttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATAtt > 1:34138319/1‑67 (MQ=255) ttCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTg < 1:37068307/68‑1 (MQ=255) cATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGcc < 1:23440299/68‑1 (MQ=255) cATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGcc > 1:23257367/1‑68 (MQ=255) cATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGcc > 1:10925866/1‑68 (MQ=255) cATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGcc > 1:24684167/1‑68 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:29486467/68‑1 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:27950883/68‑1 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:25881082/68‑1 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:3542729/68‑1 (MQ=255) aTGGGTGCCGGATACAAAAAAGGCCGCAGG‑GGTAACAGCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:35906315/68‑1 (MQ=18) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCTCATATTGCCa > 1:7879099/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:25137519/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:28380377/1‑67 (MQ=255) tGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:32359372/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:10243873/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:34966529/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:6960442/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:33193844/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:17842781/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:30236121/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:24825687/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:2155074/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:21002204/1‑67 (MQ=255) ggTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:27323000/1‑67 (MQ=255) tGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCAc < 1:12805587/67‑1 (MQ=255) tGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCAc < 1:36627828/67‑1 (MQ=255) gCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACg < 1:1689950/67‑1 (MQ=255) cGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGc < 1:18234296/67‑1 (MQ=255) ggATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg < 1:1623161/68‑1 (MQ=255) ggATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg < 1:27035150/68‑1 (MQ=255) gATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:24017179/1‑67 (MQ=40) gATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:3073017/1‑67 (MQ=40) aTACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGGAg > 1:34681582/1‑66 (MQ=255) aTACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:5735303/1‑66 (MQ=39) aTACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:29965902/1‑66 (MQ=39) aTACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:8948994/1‑66 (MQ=39) aTACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:28081026/1‑66 (MQ=39) aTACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:17096797/1‑66 (MQ=39) aTACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:20009782/1‑66 (MQ=39) aTACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAg > 1:33087629/1‑66 (MQ=39) tACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGcc < 1:9566889/67‑1 (MQ=37) tACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGcc < 1:14083068/67‑1 (MQ=37) aCAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTg > 1:20702781/1‑68 (MQ=35) aCAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTg > 1:20447178/1‑68 (MQ=35) aaaaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc > 1:36053356/1‑67 (MQ=35) aaaaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc > 1:5002167/1‑67 (MQ=35) aaaaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc > 1:33749496/1‑67 (MQ=35) aaaaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc > 1:11915565/1‑67 (MQ=35) aaaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACg > 1:7961720/1‑67 (MQ=35) aaaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACg > 1:8288825/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:25594559/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:22659492/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:11002965/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:18754897/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:1747475/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:513429/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:15383791/1‑67 (MQ=35) aaaGGCCGCAGGCTGTTAC‑CCCTGCGGACGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:34241071/1‑67 (MQ=25) | TCTGCGTTAAGACTTTTTTCATGGGTGCCGGATACAAAAAAGGCCGCAGGCTGTTAC‑CCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCG > CP009273/1264508‑1264615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |