| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5206612 | 14 (0.290) | 11 (0.320) | 10/182 | 2.7 | 46.9% | intergenic (‑101/‑79) | PP_4582/PP_4583 | membrane protein/putative Peptidase |
| ? | NC_002947 | = 5206633 | 15 (0.430) | intergenic (‑122/‑58) | PP_4582/PP_4583 | membrane protein/putative Peptidase | |||||
CACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5206443‑5206612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcctgtgccggcctcttcgcgggtaaacccgctccAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCAT < NC_002947/5206633‑5206544 CACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGACCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGTTTTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTC > 1:235882/1‑150 GCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGC < 1:426319/150‑1 GCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGC < 2:1081878/150‑1 TAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTC < 2:838262/138‑1 TAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTC > 1:838262/1‑138 AAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCG < 2:35987/150‑1 AGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGC < 1:333231/150‑1 GCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTC < 1:27485/150‑1 CTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAAC > 2:230787/1‑150 TGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGGAAAGCCGCTCCtccttcg > 1:829144/1‑143 CAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGG < 2:1059925/124‑1 CAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGG > 1:1059925/1‑124 GTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG < 1:230787/150‑1 GTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGAAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTAC < 2:583764/150‑1 GATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAG > 1:472315/1‑98 GATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAG < 2:472315/98‑1 TATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTA < 2:205679/103‑1 TATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTA > 1:205679/1‑103 TTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGG < 1:560595/103‑1 TTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGG > 2:560595/1‑103 GCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG < 1:831182/79‑1 GCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG > 2:831182/1‑79 CGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAA > 2:278335/1‑106 CGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAA < 1:278335/106‑1 CTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCAT > 2:941450/1‑113 CTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCAT < 1:941450/113‑1 TCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGC < 2:719893/72‑1 TCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGC > 1:719893/1‑72 TCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAG > 2:326169/1‑57 TCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAG < 1:326169/57‑1 CAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGTCGGCACA < 2:733981/54‑1 CAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGTCGGCACA > 1:733981/1‑54 CACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5206443‑5206612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcctgtgccggcctcttcgcgggtaaacccgctccAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAACACTGTCTGCGCCCGGAAAAGTGTTTATCAT < NC_002947/5206633‑5206544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |