New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 413997 =47 (0.960)15 (0.390) 13/200 2.4 30.4% intergenic (+14/‑189) glnE/waaF glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
?NC_002947 414083 = 32 (0.840)intergenic (+100/‑103) glnE/waaF glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II

TGAAGTGTACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGC  >  NC_002947/413848‑414142
                                                                                                                                                     |                                                                                                                                                 
tGAAGTGTACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCtt                                                                                                                                                   >  2:18978/1‑150 (MQ=255)
       gtcgccgacccagctggggccaatgatcagtattctcatgcttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTCTTcgcg                                                                                                                                            >  2:1188744‑M1/143‑150 (MQ=255)
         cgccgacccagctggggcaaatgatcaggattctcatgcttagttcagaaacgctcgtggaggctacaggctgcggtacagcctggcctcgcctctttatattcaggctatgtggcggacagtgtaccactctaatggccTATTCGCggg                                                                                                                                          >  2:88592‑M1/141‑150 (MQ=255)
                ccagctggggccaatgatcagtattctcatgcttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGccc                                                                                                                                   <  1:255876‑M1/17‑1 (MQ=255)
                  agctggggccaatgatcagtattctcatgcttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCTTGCCCGc                                                                                                                                 >  1:822183‑M1/132‑150 (MQ=255)
                       gggccaatgatcagtattctcatgcttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCca                                                                                                                            >  2:869451‑M1/127‑150 (MQ=255)
                          ccTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAg                                                                                                                         >  2:481385/1‑150 (MQ=255)
                           caatgatcagtattctcatgcttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAgg                                                                                                                        >  1:601676‑M1/123‑150 (MQ=255)
                            tCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGt                                                                                                                       >  2:309333/1‑150 (MQ=255)
                            tCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGATGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGt                                                                                                                       >  1:1142664/1‑150 (MQ=255)
                                 tcagtattctcatgcttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAgg                                                                                                                        >  1:398000‑M1/117‑144 (MQ=255)
                                 tcagtattctcatgcttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAgg                                                                                                                        <  2:398000‑M1/28‑1 (MQ=255)
                                         cccTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGccc                                                                                                          >  1:935878/1‑150 (MQ=255)
                                          tcatgcttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCt                                                                                                         >  2:218314‑M1/108‑150 (MQ=255)
                                            tGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACt                                                                                                                    >  1:1167966/1‑137 (MQ=255)
                                            tGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACt                                                                                                                    <  2:1167966/137‑1 (MQ=255)
                                            tGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGa                                                                                                       <  1:309333/150‑1 (MQ=255)
                                            atgcttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGa                                                                                                       <  2:181769‑M1/45‑1 (MQ=255)
                                              cAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGc                                                                                                     <  2:935878/150‑1 (MQ=255)
                                               cttagtccagaaacgctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCa                                                                                                    >  1:181769‑M1/103‑150 (MQ=255)
                                                            ggTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCt                                                                                       <  1:779085/150‑1 (MQ=255)
                                                             gctcggggaggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCtg                                                                                      <  2:749834‑M1/62‑1 (MQ=255)
                                                                aTCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTgg                                                                                   <  2:691895/150‑1 (MQ=255)
                                                                    aTGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAgtgcctgtg                                                                                           >  1:893755/1‑132 (MQ=255)
                                                                    aTGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAgtgcctgtg                                                                                           <  2:893755/138‑7 (MQ=255)
                                                                      ggctacaggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCgg                                                                             >  1:749834‑M1/80‑150 (MQ=255)
                                                                         gCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGcc                                                                                                           <  1:1155933/117‑1 (MQ=255)
                                                                         gCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGcc                                                                                                           >  2:1155933/1‑117 (MQ=255)
                                                                            aggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTcc                                                                                                                              <  1:236346‑M1/22‑1 (MQ=255)
                                                                            aggctgcggtacagcctggcctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTcc                                                                                                                              >  2:236346‑M1/74‑95 (MQ=255)
                                                                             aGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCa                                                                                                    >  2:980263/1‑120 (MQ=255)
                                                                             aGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCa                                                                                                    <  1:980263/120‑1 (MQ=255)
                                                                                   ccGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCtgtg                                                                                    >  1:707140/1‑130 (MQ=255)
                                                                                   ccGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCtgtg                                                                                    <  2:707140/130‑1 (MQ=255)
                                                                                     gATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCgg                                                                             >  2:1217188/1‑135 (MQ=255)
                                                                                     gATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCgg                                                                             <  1:1217188/135‑1 (MQ=255)
                                                                                              cGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCACCCACAGGTACTGCACAAGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGACCGCGAATACGCCCtgtg                                                     >  2:1277226/1‑150 (MQ=38)
                                                                                               cctcccctctttatattcaggctatgtggcggacagtgtaccactcacatggctTATTCGCGGGCAAGCCCGCTCCCACAGCTACTGCACAGGCCCTGAGCAATGTGCAATCCCAGTGGGAGCGGGCTTGCCCGCGAATAGGCcatgtag                                                    <  1:122367‑M1/96‑3 (MQ=255)
                                                                                                 tcccctctttatcttcatgctatgtggcggacagcgtaccacccacatggctTATGCGCGGGCAAGCCCGCTCCCTCCGGTACTGCACGGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGt                                                  >  2:122367‑M1/53‑150 (MQ=255)
                                                                                                 tcccctctttatattcaggctatgtggcggacagtgtaccactcacatgaccTATTCGCGGGCaa                                                                                                                                       <  2:412815‑M1/13‑1 (MQ=255)
                                                                                                 tcccctctttatattcaggctatgtggcggacagtgtaccactcacatgaccTATTCGCGGGCaa                                                                                                                                       >  1:412815‑M1/53‑65 (MQ=255)
                                                                                                 gAAGTGCTGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATGCGCGGGAAAGCCCGCTCCCACGGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGt                                                  <  1:18978/150‑1 (MQ=255)
                                                                                                  aattGCGGCGGATCTGTGGTGAGATGGGTTTAATCTGATACCGTGTTGGCTTATTCCCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTg                                                 <  2:1142664/147‑1 (MQ=39)
                                                                                                   ccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCtgt                                                                                     <  1:508451‑M1/63‑1 (MQ=255)
                                                                                                   ccctctttatattcaggctatgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCtgt                                                                                     >  2:508451‑M1/51‑113 (MQ=255)
                                                                                                        ggcggATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTAAGCAg                                                                                                   <  2:473591/94‑1 (MQ=255)
                                                                                                        ggcggATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTAAGCAg                                                                                                   >  1:473591/1‑94 (MQ=255)
                                                                                                                      atgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGgagcagg                                                                            >  1:999082‑M1/32‑100 (MQ=255)
                                                                                                                      atgtggcggacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGgagcagg                                                                            <  2:999082‑M1/72‑4 (MQ=255)
                                                                                                                         ttGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACt                                                                                                                    <  2:1061805/60‑1 (MQ=255)
                                                                                                                         ttGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACt                                                                                                                    >  1:1061805/1‑60 (MQ=255)
                                                                                                                         ttGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCt                          >  1:1111020/1‑150 (MQ=255)
                                                                                                                            ggTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGTAATCCCTGTCGGCGGGAGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGaa                       <  1:481385/150‑1 (MQ=255)
                                                                                                                            ggTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCaa                                                                                            <  1:479148/81‑1 (MQ=255)
                                                                                                                            ggTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCaa                                                                                            >  2:479148/1‑81 (MQ=255)
                                                                                                                             gTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGCGCAGtgtg                                                                                               <  2:726364/77‑1 (MQ=255)
                                                                                                                             gTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGtgtg                                                                                               >  1:726364/1‑77 (MQ=255)
                                                                                                                             gTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAat                      >  2:1034264/1‑150 (MQ=255)
                                                                                                                              tttAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCACTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTTTCCGCCACATAGCGTGAata                     >  1:485697/1‑150 (MQ=255)
                                                                                                                              gacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATccc                                                                                        <  2:1073014‑M1/60‑1 (MQ=255)
                                                                                                                              gacagtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATccc                                                                                        >  1:1073014‑M1/24‑83 (MQ=255)
                                                                                                                               ttAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAatat                    >  1:1198969/1‑150 (MQ=255)
                                                                                                                                 agtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATccc                                                                                        <  1:793950‑M1/60‑1 (MQ=255)
                                                                                                                                 agtgtaccactcacatggccTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATccc                                                                                        >  2:793950‑M1/21‑80 (MQ=255)
                                                                                                                                    cTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAaga               >  1:491534/1‑150 (MQ=255)
                                                                                                                                        tACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATATCCTGAATATAAAGAgggg           >  2:331299/1‑150 (MQ=255)
                                                                                                                                           cGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAgg        >  1:1267839/1‑150 (MQ=255)
                                                                                                                                            gtgtTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATcccagc                                                                                     >  1:934472/1‑69 (MQ=255)
                                                                                                                                            gtgtTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATcccagc                                                                                     <  2:934472/72‑4 (MQ=255)
                                                                                                                                               ttGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAggg            <  1:751739/142‑1 (MQ=255)
                                                                                                                                               ttGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAggg            >  2:751739/1‑142 (MQ=255)
                                                                                                                                                tGGCTGATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTTCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAgg   <  1:1277226/150‑1 (MQ=255)
                                                                                                                                                 ggCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATATCCTGAATATAAAGAGGGGAGGCCAGGc  <  1:331299/150‑1 (MQ=255)
                                                                                                                                                 ggCTTAGTCGCGGGCAAGCTCGCGCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGc  <  2:381367/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
TGAAGTGTACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGTTTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGC  >  NC_002947/413848‑414142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.