New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2799902	23 (0.850)	8 (0.300) +T	6/292	2.3	24.4%	intergenic (+18/+94)	PP_2447/puuB	hypothetical protein/gamma‑glutamylputrescine oxidase
	?	NC_002947	= 2799976	27 (1.000)					intergenic (+92/+20)	PP_2447/puuB	hypothetical protein/gamma‑glutamylputrescine oxidase

GGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2799818‑2799902 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAA  <  NC_002947/2799976‑2799901                                                                                      |                                                                             GGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTT              <  1:428651/150‑1 GGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCCTCGTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTT              <  2:339509/150‑1         TGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGA      <  1:526818/150‑1          GGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAA     <  2:1185/150‑1             CAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTTGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAA  <  1:598850/150‑1             CAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTTGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAA  <  1:598851/150‑1                                                      GCCTGAACGAATAGCGTTGCCTGTGCCGGCTTTTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCC           >  1:318227/1‑100                                                      GCCTGAACGAATAGCGTTGCCTGTGCCGGCTTTTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCC           <  2:318227/100‑1                                                                                      |                                                                             GGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2799818‑2799902 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAA  <  NC_002947/2799976‑2799901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.