| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2799902 | 23 (0.850) | 8 (0.300) +T |
6/292 | 2.3 | 24.4% | intergenic (+18/+94) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase |
| ? | NC_002947 | = 2799976 | 27 (1.000) | intergenic (+92/+20) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase | |||||
GCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGCTCTGCCTG > NC_002947/2799828‑2800124 | gCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAag < 2:19283/150‑1 (MQ=255) cGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGaggccagg > 1:599482/1‑150 (MQ=255) cAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGgcctg > 1:360935/1‑150 (MQ=255) aTTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGaa < 2:189492/150‑1 (MQ=255) ggcgAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGa > 1:135225/1‑150 (MQ=255) ggcgAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGa > 2:278206/1‑150 (MQ=255) aaCGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTgta < 2:290878/150‑1 (MQ=255) gCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCg > 1:485425/1‑150 (MQ=255) tgtgCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATg > 1:391344/1‑150 (MQ=255) catccattcGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTg < 1:331343/144‑1 (MQ=255) ttcttcGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCAAAgaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttg < 1:598850‑M2/150‑75 (MQ=255) ttcttcGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCAAAgaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttg < 1:598851‑M2/150‑75 (MQ=255) ttcGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAgaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggcc < 2:1185‑M2/150‑78 (MQ=255) tcGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGCTTGCCGGCGAAgaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggcca < 1:526818‑M2/150‑79 (MQ=255) cGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTAcgcg > 2:97596/1‑150 (MQ=255) ggCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAaaagccggcacaggcaacgctattcgttcaggc > 1:318227‑M2/1‑67 (MQ=255) ggCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAaaagccggcacaggcaacgctattcgttcaggc < 2:318227‑M2/100‑34 (MQ=255) gCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCgca > 1:411468/1‑150 (MQ=255) aaGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGACgaggccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattcatcc < 2:339509‑M2/150‑87 (MQ=255) aaGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAgaggccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattcatcc < 1:428651‑M2/150‑87 (MQ=255) cacaGGATTTGTGCTTATTGCACAGTGCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGTATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACTCGCAGCATCTGGCCAcc > 2:6943/1‑150 (MQ=255) aGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCgg < 2:432837/150‑1 (MQ=255) cTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAg > 1:354586/1‑150 (MQ=255) ttATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGt > 1:395691/1‑150 (MQ=255) ttATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGt > 2:42868/1‑150 (MQ=255) aTTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGc < 1:563312/150‑1 (MQ=255) ttGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCg > 1:598654/1‑150 (MQ=255) ttGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCACAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTAAGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCg > 2:191733/1‑150 (MQ=255) aGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGc < 1:346916/150‑1 (MQ=255) aGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGc > 2:102710/1‑150 (MQ=255) aGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGc > 1:488198/1‑150 (MQ=255) ggCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGc > 1:133472/1‑150 (MQ=255) gTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGaaa < 2:599482/150‑1 (MQ=255) ccGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGctc > 1:305058/1‑150 (MQ=255) aaGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGCTCTGCCTg > 2:605100/1‑150 (MQ=255) | GCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGCTCTGCCTG > NC_002947/2799828‑2800124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |