| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 336209 = | 11 (0.410) | 4 (0.180) | 3/240 | 2.9 | 32.0% | intergenic (+54/+339) | PP_0278/PP_0279 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 336329 = | 8 (0.360) | intergenic (+174/+219) | PP_0278/PP_0279 | hypothetical protein/hypothetical protein | |||||
TACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAA > NC_002947/336062‑336349 | tACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAttt < 1:198513/150‑1 (MQ=255) cATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgt > 2:41116/1‑150 (MQ=255) ttggcttattcctgcttgcggctgcagcccagtaaaaacaggcgtttgcgcaaagaccagcggcgtagcgatccggcatgcctttcgctcaggtcccaaatgccacttgtgcataaacatttcttgtggttagcgcaagcggctTTtgtg > 2:351671‑M1/145‑150 (MQ=255) gcttattcctgcttgcggctgcagcccagtaaaaacaggcgtttgcgcaaagaccagcggcgtagcgatccggcatgcctttcgctcaggtcccaaatgccacttgtgcataaacatttcttgtggttagcgcaagcggctTTTGTGGGa < 1:316341‑M1/9‑1 (MQ=255) ttattcctgcttgcggctgcagcccagtaaaaacaggcgtttgcgcaaagaccagcggcgtagcgatccggcatgcctttcgctcaggtcccaaatgccacttgtgcataaacatttcttgtggttagcgcaagcggctTTTGTGGGAGc > 1:224638‑M1/140‑150 (MQ=255) tattcctgcttgcggctgcagcccagtaaaaacaggcgtttgcgcaaagaccagcggcgtagcgatccggcatgcctttcgctcaggtcccaaatgccacttgtgcataaacatttcttgtggttagcgcaagcggctTTTGTGGGAGCg > 2:166930‑M1/139‑150 (MQ=255) ctgcttgcggctgcagcccagtaaaaacaggcgtttgcgcaaagaccagcggcgtagcgatccggcatgcctttcgctcaggtcccaaatgccacttgtgcataaacatttcttgtggttagcgcaagcggctTTTGTGGGAGCGGCCtt > 1:272669‑M1/134‑150 (MQ=255) tgcggctgcagcccagtaaaaacaggcgtttgcgcaaagaccagcggcgtagcgatccggcatgcctttcgctcaggtcccaaatgccacttgtgcataaacatttcttgtggttagcgcaagcggctTTTGTGGGAGCGGCCTTGCGTc > 2:525141‑M1/129‑150 (MQ=255) gcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTc < 1:374514/150‑1 (MQ=255) cGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATg < 2:321655/150‑1 (MQ=255) tatGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGc < 2:106815/150‑1 (MQ=255) gcaaagaccagcggcgtagcgatccggcatgcctttcgctcaggtcccaaatgccacttgtgcataaacatttcttgtggttagcgcaagcggctTTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTc < 2:455636‑M1/55‑1 (MQ=255) gATTACCTGTGCGACAGGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTgcgc < 2:251611/150‑1 (MQ=255) tccggcatgcctttcgctcaggtcccaaatgccacttgtgcataaacatttcttgtggttagcgcaagcggctTTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACgggg > 1:455636‑M1/74‑150 (MQ=255) aGGCGCTGATGAACGATATCGAGATCGCCCAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCg < 1:135755/150‑1 (MQ=255) aGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCg < 1:135866/150‑1 (MQ=255) atgaACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTc < 2:221103/150‑1 (MQ=255) aggtcccacaggccacttgtgcataaacatttcttgtggttagcgcacgcggctTTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTc > 2:203840‑M1/55‑150 (MQ=255) aggtcccaaatgccacttgtgcatacacatttcttgtggttcgcgcaagcggctTTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTc > 1:249644‑M1/55‑150 (MQ=255) gagaTCGCCATGGGTATGGCGCATTCGGCATTGACGGGGTCATTTGTGGGAGCGGCCTTGCGTGGCGAATGGGCTGCAAAGCTGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGc < 1:41116/150‑1 (MQ=38) aCGCGGTCATTTGTGGGAGTGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTTACCACaa > 2:593159/1‑150 (MQ=255) | TACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAA > NC_002947/336062‑336349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |