New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	336209 =	11 (0.410)	4 (0.180)	3/240	2.9	32.0%	intergenic (+54/+339)	PP_0278/PP_0279	hypothetical protein/hypothetical protein
	?	NC_002947	336329 =	8 (0.360)					intergenic (+174/+219)	PP_0278/PP_0279	hypothetical protein/hypothetical protein

ACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAA  >  NC_002947/336200‑336472                                                                                                                                  |                                                                                                                                                aCGCGGTCATTTGTGGGAGTGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTTACCACaa                                                                                                                             >  2:593159/1‑150 (MQ=255)                                  gaaagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaaAGCCGCTTGCGCGAACCACAAGAAATGTGTATGCACAAGTGGCATTTGGGACCt                                                                                            >  1:249644‑M2/97‑150 (MQ=255)                                  gaaagggccgcaaagcggcccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaaAGCCGCGTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCCTGTGGGACCt                                                                                            >  2:203840‑M2/97‑150 (MQ=255)                                                gcagcCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGTACAAGTGGCATTTGGGACCTGAGCGAAAGGCATg                                                                              >  2:193989/1‑150 (MQ=255)                                                     ccccgttttcagcgcaatctctgaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaaAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGa                                                                         >  1:455636‑M2/78‑150 (MQ=255)                                                       cGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATc                                                                       >  1:196814/1‑150 (MQ=255)                                                       cGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATc                                                                       >  2:25439/1‑150 (MQ=255)                                                                 agagATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTAcgccgc                                                             >  2:443153/1‑150 (MQ=255)                                                                           gaaatcgccggggctgctttgcagcccattcgcgacgcaaggccgctcccacaaaAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTgc                                                   <  2:455636‑M2/95‑1 (MQ=255)                                                                            tGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTgcg                                                  >  1:413633/1‑150 (MQ=255)                                                                                            aaagCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTa                                  >  2:379956/4‑150 (MQ=255)                                                                                            aaagCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCAGTTGGGACCTGAGCGACAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTa                                  >  2:594502/4‑150 (MQ=255)                                                                                                            gacgcaaggccgctcccacaaaAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCa                  >  2:525141‑M2/23‑150 (MQ=255)                                                                                                                 aaggccgctcccacaaaAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAg             >  1:272669‑M2/18‑150 (MQ=255)                                                                                                                      cgctcccacaaaAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATa        >  2:166930‑M2/13‑150 (MQ=255)                                                                                                                       gctcccacaaaAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATaa       >  1:224638‑M2/12‑150 (MQ=255)                                                                                                                         tcccacaaaAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGc     <  1:316341‑M2/141‑1 (MQ=255)                                                                                                                            cacaaaAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCaa  >  2:351671‑M2/7‑150 (MQ=255)                                                                                                                                  |                                                                                                                                                ACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATTGCGCTGAAAACGGGGGCCGCTTTGCGGCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCCGCTTGCGCTAACCACAAGAAATGTTTATGCACAAGTGGCATTTGGGACCTGAGCGAAAGGCATGCCGGATCGCTACGCCGCTGGTCTTTGCGCAAACGCCTGTTTTTACTGGGCTGCAGCCGCAAGCAGGAATAAGCCAA  >  NC_002947/336200‑336472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.