New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2062815	13 (0.480)	3 (0.130)	3/246	3.0	20.1%	intergenic (+39/+89)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2062855	13 (0.570)					intergenic (+79/+49)	PP_1832/PP_1833	oxidase/hypothetical protein

ACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATGACCGGC  >  NC_002947/2062671‑2062961                                                                                                                                                 |                                                                                                                                                   acCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACgaccg                                                                                                                                               >  1:376159‑M1/1‑145 (MQ=255)           cTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACATTGACTGCGCGATg                                                                                                                                     <  1:267641/150‑1 (MQ=255)           cTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACATTGACTGCGCGATg                                                                                                                                     <  1:267679/150‑1 (MQ=255)           cTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACATTGACTGCGCGATg                                                                                                                                     <  1:411175/150‑1 (MQ=255)                                            aTGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACgaccgacggttgcgccgcccttaggcatcgcgcagtcaatgtaggagc                                                                                                    <  2:412354‑M1/150‑49 (MQ=255)                                              gCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCgtaggagcgg                                                                                                  >  1:247484‑M2/1‑140 (MQ=255)                                               cAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACgaccgacggttgcgccgcccttaggcatcgcgcagtcaatgtaggagcggg                                                                                                 <  2:376159‑M1/150‑52 (MQ=255)                                                                                       ttGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACAATGGCTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGGAGGAGCGGGTTCACCCCCGAAGAGGCCCGGTCAGGCAATACACCCcaca                                                         >  2:350877/1‑150 (MQ=255)                                                                                               gacgaGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACAATTACTGCGCGATGCCGAAGGGCGGCGCAACCGGCGGTCGTAGGAGCGGGTTAACCCCCGCCGAGGCCACTTCAGGCAAAAAACCCCACAGCGGTAgg                                                 >  2:340641/1‑150 (MQ=255)                                                                                                    gCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGACCCCGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCggc                                            <  1:195488/150‑1 (MQ=255)                                                                                                         aaTCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCggcaaggc                                       <  1:352920/150‑1 (MQ=255)                                                                                                         aaTCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGTAGGAGAGGGTTCACCCGCGAAGAGGCCAATTCAGGCAATACACCCCTCAGCGGTAGGTCggcaaggc                                       <  2:205359/150‑1 (MQ=255)                                                                                                         aaTCGCATGGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACATTGACTGCGCGAGGCCTACGGGCGGCGCAACCGTCGGCCGTCGGCGCGGGTACACCCGCGAAGAGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCggcaaggc                                       <  1:535292/150‑1 (MQ=255)                                                                                                                                    gAACCCGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCgg            <  2:242212/150‑2 (MQ=255)                                                                                                                                     aaCCCGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCgag           >  2:95975/1‑150 (MQ=255)                                                                                                                                       cccGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCgtaggagcgggttcacccgcgaagcggccggcaatgcgattacagctcgtcgataccaagaaatgcccgcgcagtcacatcgcccgtaaaccgcgcctg         <  2:376159‑M2/150‑100 (MQ=255)                                                                                                                                        ccGCTCCTACgaccgacggttgcgccgcccttaggcatcgcgcagtcaatgtaggagcgggttcacccgcgaagcggccggcaatgcgattacagctcgtcgataccaagaaatgcccgcgcagtcacatcgcccgtaaaccgcgcctgc        >  1:247484‑M1/1‑10 (MQ=255)                                                                                                                                        ccGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATg        <  2:34163/150‑1 (MQ=255)                                                                                                                                          gCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCgtaggagcgggttcacccgcgaagcggccggcaatgcgattacagctcgtcgataccaagaaatgcccgcgcagtcacatcgcccgtaaaccgcgcctgcat      <  2:412354‑M2/150‑103 (MQ=255)                                                                                                                                              cTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATGACCGGc  >  2:304530/1‑150 (MQ=255)                                                                                                                                                 |                                                                                                                                                   ACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACATTGACTGCGCGATGCCTAAGGGCGGCGCAACCGTCGGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTTCAGGCAATACACCCCTCAGCGGTAGGTCGGCAAGGCAAACCGCTGCTGGCTCTGCAGCATCGAGATGACCGGC  >  NC_002947/2062671‑2062961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.