| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4529388 = | 18 (0.670) | 7 (0.290) | 5/266 | 2.4 | 31.6% | intergenic (+18/‑175) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein |
| ? | NC_002947 | 4529423 = | 14 (0.570) | intergenic (+53/‑140) | idh/PP_4013 | isocitrate dehydrogenase/MutT/nudix family protein | |||||
ATCGTCGCCGAGCTCAACGCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACA > NC_002947/4529239‑4529532 | aTCGTCGCCGAGCTCAACGCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACa < 1:449328/150‑1 (MQ=255) ttaacagatacttgaagtcgagcatgacccctgtaggagcgggttcaccaaccaaagcgatggttacgcaaaagacgcatacgccggtaaacccgctcctacaaaggccgatgcaggccgccagatatcattaatccagaaAGCACAAAc < 2:413314‑M1/9‑1 (MQ=255) gCTCAACGCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAAcccc < 1:257871/150‑1 (MQ=255) aaCGCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTAGAAGTAACAGCACAAACCCCGGcc > 1:413314/1‑150 (MQ=255) gCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACg > 1:488514/1‑150 (MQ=255) gtgcatgacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGt > 1:502583‑M1/123‑150 (MQ=255) gcatgacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGttt > 2:552301‑M1/121‑150 (MQ=255) gcatgacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGttt > 1:441956‑M1/121‑150 (MQ=255) atgacccctgtaggagcgggttcacccgcgaatgcgatggtgaggcaaatgacgcattcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGTTtgt > 2:462828‑M1/119‑150 (MQ=255) cagccGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGTGCGTGGCCGGGGTTTGTGCt < 1:519979/150‑1 (MQ=255) cGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCt < 1:591592/150‑1 (MQ=255) ttcacccgcgaatgcgatggtgaggcaaatgacgccttcgcgggtaaacccgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACACACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGatat > 2:353711‑M1/99‑150 (MQ=255) cccGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTggcggc > 2:274286/1‑150 (MQ=255) ggTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCgg < 1:454671/150‑1 (MQ=255) cccAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCcg > 1:122880/1‑150 (MQ=255) cgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGatat < 2:584698‑M1/52‑1 (MQ=255) cgctcctacaaaggccgatgcaggccgccagatatcatttatccagaaAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGatat > 1:584698‑M1/49‑100 (MQ=255) aCCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTc > 2:4222/1‑150 (MQ=255) cTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTcgcg > 2:251933/1‑150 (MQ=255) tGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCgg > 1:244268/1‑150 (MQ=255) tAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGt > 2:578966/1‑150 (MQ=255) tGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTAAACCcgctcc > 2:242115/1‑103 (MQ=255) tGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTAAACCcgctcc < 1:242115/106‑4 (MQ=255) tGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTCGTAGGAGCGGGTAAACCcgctcc > 2:242086/1‑103 (MQ=255) tGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTCGTAGGAGCGGGTAAACCcgctcc < 1:242086/106‑4 (MQ=255) gTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACa < 2:138273/150‑1 (MQ=255) | ATCGTCGCCGAGCTCAACGCCGTTCAGGGCAAGCCAGCCGACATCGGCGGCTACTACGCCCCGGATGCCGAGCTGACCGCCAAGGTGATGCGCCCAAGCCAGACCCTGAACAGCGCCATCGCTGCCCTGTAAGGTTCGCTTGAAGTAACAGCACAAACCCCGGCCACGCACCGGGGTTTGTGCTTTCTGGATAAATGATATCTGGCGGCCTGCATCGGCCTTTGTAGGAGCGGGTTTACCCGCGAATGCGTCATTTGCCTCACCATCGCATTCGCGGGTGAACCCGCTCCTACA > NC_002947/4529239‑4529532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |