| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1015854 | 1 (0.040) | 19 (0.730) | 18/284 | 0.4 | 66.7% | intergenic (‑81/‑687) | SBRG_Ecoli_galE/prfC | SBRG_Ecoli_galE/peptide chain release factor 3 |
| ? | NC_002947 | = 5067412 | 18 (0.690) | coding (1092/1098 nt) | PP_4459 | transposase | |||||
TTACCACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCTTTTGATTA > NC_002947/5067270‑5067553 | ttACCACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaat > 2:142713‑M2/1‑143 (MQ=255) cACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttat < 2:349631‑M2/150‑12 (MQ=255) cACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGt > 1:309988/1‑150 (MQ=255) cACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTAAGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGAGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGt > 2:608542/1‑150 (MQ=255) aCGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttatt < 1:347974‑M2/150‑13 (MQ=255) gTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGc < 1:517133/150‑1 (MQ=255) aaCGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgc < 1:38362‑M2/150‑31 (MQ=255) ggTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTgg < 1:139382/150‑1 (MQ=255) cTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGcc < 2:331696/150‑1 (MQ=255) gcgcGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcata > 1:302981‑M2/1‑92 (MQ=255) gAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccat < 1:71142‑M2/150‑63 (MQ=255) ggTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagc > 1:320331‑M2/1‑84 (MQ=255) aGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaat > 1:140450‑M2/1‑79 (MQ=255) aTCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCCCGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCGACCCAGACACGATgcgcgag > 2:414569/1‑147 (MQ=255) tGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaa > 2:342279‑M2/1‑71 (MQ=255) cAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTa < 1:4456/150‑1 (MQ=255) aGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatga > 1:23481‑M2/1‑65 (MQ=255) aGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatga > 2:576852‑M2/1‑65 (MQ=255) ggTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGAtt < 1:575198/150‑1 (MQ=255) ccGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAAtt > 1:585234/1‑150 (MQ=255) agGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgatttatgagagttctggttaccggtg > 2:277901‑M2/1‑47 (MQ=255) gCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTccc > 2:402297/1‑150 (MQ=255) agaATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCt < 1:536838/150‑1 (MQ=255) agaATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCt < 1:397407/150‑1 (MQ=255) aTAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttacattggaa > 2:210811‑M2/1‑29 (MQ=255) tAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttacattggaag < 2:59469‑M2/150‑123 (MQ=255) aaaGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttacattggaagt > 1:457102‑M2/1‑27 (MQ=255) aaaGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTagcag > 2:226630/1‑150 (MQ=255) gTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttacattggaagtcatacctgt > 1:445557‑M2/1‑18 (MQ=255) tttATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCtt > 1:456965/1‑150 (MQ=255) ttATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCttt < 1:512448/150‑1 (MQ=255) ttATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCttt < 1:512443/150‑1 (MQ=255) tATCTGAGACAGGACACTAGCCTGTAGCTACTCAGACAGTCCTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTCAATTACTTCCCCAACCCCATTGCTAGCAGCGCGAAAGCtttt < 2:309988/150‑1 (MQ=255) tCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttacattggaagtcatacctgtgtgcaa > 1:244133‑M2/1‑12 (MQ=255) tCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCTTTTGa < 1:99493/150‑1 (MQ=255) cTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttacattggaagtcatacctgtgtgcaat > 1:349631‑M2/1‑11 (MQ=255) gagaCAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttacattggaagtcatacctgtgtgcaatta < 2:48674‑M2/150‑142 (MQ=255) | TTACCACGTTTTTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAAGCTTTTGATTA > NC_002947/5067270‑5067553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |