| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 1,515,811 | (33-bp)2→1 | pseudogene (715‑747/1851 nt) | PP_1325 ← | putative lipoprotein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 1515769 | 1515801 | 33 | 24 [0] | [0] 24 | PP_1325 | putative lipoprotein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1515802 = | 0 (0.000) | 18 (0.930) | 12/210 | 0.5 | 100% | pseudogene (756/1851 nt) | PP_1325 | putative lipoprotein |
| ? | NC_002947 | = 1515768 | 0 (0.000) | pseudogene (790/1851 nt) | PP_1325 | putative lipoprotein | |||||
GAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTG > NC_002947/1515635‑1515915 | gAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctgg < 2:43007‑M2/150‑17 (MQ=255) tGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctgg < 2:453151‑M2/150‑21 (MQ=255) tGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctgg < 1:325933‑M2/150‑21 (MQ=255) tCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggcc > 2:137437‑M2/1‑128 (MQ=255) acCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctcc < 2:354422‑M2/150‑29 (MQ=255) cAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttgg < 1:36488‑M2/150‑39 (MQ=255) gctggctgGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagg > 1:137350‑M2/1‑107 (MQ=255) gctggctgGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagg > 1:137364‑M2/1‑107 (MQ=255) gctggctgGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagg > 1:137365‑M2/1‑107 (MQ=255) gctggctgGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagg > 2:145670‑M2/1‑107 (MQ=255) tttGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagtt < 2:419403‑M2/150‑57 (MQ=255) tGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgg > 1:370010‑M2/1‑89 (MQ=255) ggcCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgcggggcggcagggtggtccgg > 2:89132‑M2/1‑72 (MQ=255) cATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtg < 2:55888‑M2/150‑82 (MQ=255) aaGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgt > 1:128921‑M2/1‑65 (MQ=255) aGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtt > 1:435322‑M2/1‑64 (MQ=255) gcgcAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCATGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgaccca > 1:99795‑M2/1‑57 (MQ=255) gcgcAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgaccca > 2:16302‑M2/1‑57 (MQ=255) gcgcAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgaccca > 1:507307‑M2/1‑57 (MQ=255) gcAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccagg < 1:112180‑M2/150‑96 (MQ=255) aGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggct > 2:181008‑M2/1‑53 (MQ=255) aGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggct > 2:232394‑M2/1‑53 (MQ=255) cGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgct < 2:213605‑M2/150‑114 (MQ=255) gATcttggtcagcggctggctggccagctccttgagcttggtcagggccagcggcagttgctgggcggcagggtggtccgggtgctgtttgacccaggcttcgatggccgcttgctgctgctccagggtgccggcgcttttcacggcgaa > 1:453151‑M2/1‑3 (MQ=255) | GAGCTGTCGAACACCTGTACCGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTG > NC_002947/1515635‑1515915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |