New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	298218 =	16 (0.960)	4 (0.250)	4/278	1.6	20.2%	coding (324/384 nt)	PP_0244	hypothetical protein
	?	NC_002947	298244 =	16 (0.990)					coding (298/384 nt)	PP_0244	hypothetical protein

ATGGGCCTGGCCTGCTCGGCCAGCCATGGCTTTGACCAGCAAAGCGTCACCATCGAGTGCAAGATCAACTACATGCGTGCCGTCAGCGACGGCGAAGTGCTGTGCACCGCTCGTGTGCTGCACGCCGGGCGGCGCACCCTGGTGGTCGACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/298370‑298218 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGG  >  NC_002947/298244‑298365                                                                                                                                                                                                                                                                                     ATGGGCCTGGCCTGCTCGGCCAGCCATGGCTTTGACCAGCAAAGCGTCACCATCGAGTGCAAGATCAACTACATGCGTGCCGTCAGCGACGGCGAAGTGCTGTGCACCGCTCGTGTGCTGCACGCCGGGCGGCGCACCCTGGTGGTCGAC                                                                                                                               <  1:254961/150‑1                                                                                                                       TGCACGCCGGGCGGCGCACCCTGGTGGTCGACGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGG                <  1:141943/143‑1                                                                                                                       TGCACGCCGGGCGGCGCACCCTGGTGGTCGACGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGG                >  2:141943/1‑143                                                                                                                                GGCGGCGCACCCTGGTGGTCGACGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGG  <  1:39219/148‑1                                                                                                                                GGCGGCGCACCCTGGTGGTCGACGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGG  >  2:39219/1‑148                                                                                                                                                                                                                                                                                     ATGGGCCTGGCCTGCTCGGCCAGCCATGGCTTTGACCAGCAAAGCGTCACCATCGAGTGCAAGATCAACTACATGCGTGCCGTCAGCGACGGCGAAGTGCTGTGCACCGCTCGTGTGCTGCACGCCGGGCGGCGCACCCTGGTGGTCGACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/298370‑298218 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGG  >  NC_002947/298244‑298365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.