| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 298218 = | 16 (0.960) | 4 (0.250) | 4/278 | 1.6 | 20.2% | coding (324/384 nt) | PP_0244 | hypothetical protein |
| ? | NC_002947 | 298244 = | 16 (0.990) | coding (298/384 nt) | PP_0244 | hypothetical protein | |||||
AGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGT > NC_002947/298110‑298378 | ccagccatggctttgaccagcaaagcgtcaccatcgagtgcaagatcaactacatgcgtgccgtcagcgacggcgaagtgctgtgcaccgctcgtgtgctgcacgccgGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgca < 1:141943‑M1/35‑1 (MQ=255)ccagccatggctttgaccagcaaagcgtcaccatcgagtgcaagatcaactacatgcgtgccgtcagcgacggcgaagtgctgtgcaccgctcgtgtgctgcacgccgGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTgca > 2:141943‑M1/109‑143 (MQ=255) gcagTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGa < 1:67711/150‑1 (MQ=255) cagTGCCAGCGCACTGCTGGAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGTGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAg < 2:324678/150‑1 (MQ=255) cagTGCCAGCGCACTGCTGGAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGTGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAg < 2:234939/150‑1 (MQ=255) aGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGca < 1:49390/150‑1 (MQ=255) aGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGca < 1:66906/150‑1 (MQ=255) cACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGc > 1:371242/1‑150 (MQ=255) cTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACg < 2:284469/150‑1 (MQ=255) tGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGt < 2:124759/150‑1 (MQ=255) agaACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTg < 2:70657/150‑1 (MQ=255) agaACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTg < 2:261447/150‑1 (MQ=255) gcgAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCg > 2:115785/1‑150 (MQ=255) caccaGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCaaa > 1:104794/1‑150 (MQ=255) ccaGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGACatcgc < 1:358372/150‑5 (MQ=255) cccTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGcc < 1:115785/150‑1 (MQ=255) tgcacgccgggcggcgcaccctggtggtcgacgccCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCAtggctgg > 2:141943‑M2/36‑143 (MQ=255) tgcacgccgggcggcgcaccctggtggtcgacgccCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCAtggctgg < 1:141943‑M2/108‑1 (MQ=255) tCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGcaggccagg < 1:48961/150‑1 (MQ=255) ggcggcgcaccctggtggtcgacgccCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGcaggccagg < 1:39219‑M2/122‑1 (MQ=255) ggcggcgcaccctggtggtcgacgccCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGcaggccagg > 2:39219‑M2/27‑148 (MQ=255) GTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCAt < 1:254961‑M1/150‑1 (MQ=255) ccaGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGt > 1:315147/1‑150 (MQ=255) | AGCAGTGCCAGCGCACTGCTGAAAATACCGCAGATACTGCTTGGTGAGCTAGAGAACCGCGAAGGTTCCTTGCGCTTTGGCCACCAGCTTGTCGCCCTGAACTACGTCGGCGTCGACCACCAGGGTGCGCCGCCCGGCGTGCAGCACACGAGCGGTGCACAGCACTTCGCCGTCGCTGACGGCACGCATGTAGTTGATCTTGCACTCGATGGTGACGCTTTGCTGGTCAAAGCCATGGCTGGCCGAGCAGGCCAGGCCCATGGCGATGT > NC_002947/298110‑298378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |