New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 867921	18 (1.080)	5 (0.310)	4/280	1.6	21.0%	intergenic (+16/+161)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	= 868013	20 (1.220)					intergenic (+108/+69)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase

GCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/867842‑867921 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGCACTGGCTACAGATCAGCCACGGGCTTTATCGATGATCTCGATGTACTCAGGG  <  NC_002947/868013‑867866                                                                                                                                                                                                                                      GCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGA                                                                                <  1:357059/150‑1                               GTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTG                                                                                   <  1:93066/117‑1                               GTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTG                                                                                   >  2:93066/1‑117                                                         GTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTG                                                                                   <  1:308894/91‑1                                                         GTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTG                                                                                   >  2:308894/1‑91                                                                               CGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGCACTGGCTACAGATCAGCCACGGGCTTTATCGATGATCTCGATGTACTCAGGG  >  2:295016/1‑150                                                                               CGCCCTCTCCGCGGGCAGGCCCGCTCCCACAGGTTCGGTAAGGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGCACTGGCTACAGATCAGCCACGGGCTTTATCGATGATCTCGATGTACTCAGGG  <  2:154235/150‑1                                                                                                                                                                                                                                      GCAGATTGCCGACCAGCGCAATGCCCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/867842‑867921 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGCACTGGCTACAGATCAGCCACGGGCTTTATCGATGATCTCGATGTACTCAGGG  <  NC_002947/868013‑867866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.