| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1526707 | 11 (0.660) | 4 (0.260) | 3/268 | 1.8 | 24.8% | coding (852/957 nt) | ddlB | D‑alanine‑‑D‑alanine ligase B |
| ? | NC_002947 | = 1526720 | 14 (0.900) | coding (865/957 nt) | ddlB | D‑alanine‑‑D‑alanine ligase B | |||||
AACTGATCGACCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1526586‑1526707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccaggcTATGATCTGTCATGCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAGTTCCTGTTC < NC_002947/1526720‑1526579 AACTGATCGACCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTGTCATGCCTGGTGCGGTGTT < 1:310298/150‑1AACTGATCGACCTGACCGCGCGCGCCTGCGATGCCAGTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTGTCATGCCTGGTGCGGTGTT < 1:310304/150‑1 GCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTGTCATGCCTGGTGCGG < 1:349279/76‑1 GCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCTATGATCTGTCATGCCTGGTGCGG > 2:349279/1‑76 CACCAGGCTATGATCTGTCATGCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAGTTCCTGTTC < 2:320700/150‑1 AACTGATCGACCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1526586‑1526707‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccaggcTATGATCTGTCATGCCTGGTGCGGTGTTGACTTCGAGCAGCCAGAACCGGCCCTGCTCGTCCTGCATCACGTCCAACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGCGCGCGCGGTCAGGTCGATCAGTTCCTGTTC < NC_002947/1526720‑1526579 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |