New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1526707	11 (0.660)	4 (0.260)	3/268	1.8	24.8%	coding (852/957 nt)	ddlB	D‑alanine‑‑D‑alanine ligase B
	?	NC_002947	= 1526720	14 (0.900)					coding (865/957 nt)	ddlB	D‑alanine‑‑D‑alanine ligase B

GAACAGGAACTGATCGACCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCGAGGTTAATAACCATGCAAGGCGCGATGATACGTCAGCAGCAACCCGTTACCGGCCGTA  >  NC_002947/1526579‑1526863                                                                                                                                              |                                                                                                                                                gaacaggaacTGATCGACCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAgcctggtg                                                                                                                                         <  2:320700‑M2/150‑9 (MQ=255)                 aCCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTg                                                                                                                         >  2:43040/1‑150 (MQ=255)                    tGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCgg                                                                                                                      >  2:187105/1‑150 (MQ=255)                                 cttcGATGCCAATGGCATCGCAGGCTGTGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTg                                                                                                              <  1:265057/142‑1 (MQ=255)                                 cttcGATGCCAATGGCATCGCAGGCTGTGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTg                                                                                                              >  2:265057/4‑145 (MQ=255)                                           aTTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTg                                                                                               <  1:43040/150‑1 (MQ=255)                                                 aTCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCGGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTg                                                                                         <  1:277504/150‑1 (MQ=255)                                                                                           ggCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCGAGGt                                                        <  1:307666/141‑1 (MQ=255)                                                                                           ggCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCGAGGt                                                        >  2:307666/1‑141 (MQ=255)                                                                                                        tgctCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCAAGGTTAATAACCATGCAAGGCGCgat                                  <  1:323439/150‑1 (MQ=255)                                                                                                               aGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCGAGGTTAATAACCATGCAAGGCGCGATGATACGt                           <  1:73919/150‑1 (MQ=255)                                                                                                                   aaCACCGCACCAGGCATGACAGATCATAgcctggtgcggtgttgacttcgagcagccagaaccggccctgctcgtcctgcatcacgtccaaccgcccccagccttcgatgccactggcatcgcaggcgcgcgcggtcaggtcgatcagtt                       <  1:310304‑M2/150‑123 (MQ=255)                                                                                                                   aaCACCGCACCAGGCATGACAGATCATAgcctggtgcggtgttgacttcgagcagccagaaccggccctgctcgtcctgcatcacgtccaaccgcccccagccttcgatgccaatggcatcgcaggcgcgcgcggtcaggtcgatcagtt                       <  1:310298‑M2/150‑123 (MQ=255)                                                                                                                       ccGCACCAGGCATGACAGATCATAgcctggtgcggtgttgacttcgagcagccagaaccggccctgctcgtcctgc                                                                                             <  1:349279‑M2/76‑53 (MQ=255)                                                                                                                       ccGCACCAGGCATGACAGATCATAgcctggtgcggtgttgacttcgagcagccagaaccggccctgctcgtcctgc                                                                                             >  2:349279‑M2/1‑24 (MQ=255)                                                                                                                                 cATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCGAGGTTAATAACCATGCAAGGCGCGATGATACGTCAGCAGCAACCCGTTAcc         <  1:48874/150‑1 (MQ=255)                                                                                                                                     aCAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCGAGGTTAATAACCATGCAAGGCGCGATGATACGTCAGCAGCAACCCGTTACCGGcc     >  1:247942/1‑150 (MQ=255)                                                                                                                                        gATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCGAGGTTAATAACCATGCAAGGCGCGATGATACGTCAGCAGCAACCCGTTACCGGCCGTa  <  1:317796/150‑1 (MQ=255)                                                                                                                                        gATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCGAGGTTAATAACCATGCAAGGCGCGATGATACGTCAGCAGCAACCCGTTACCGGCCGTa  <  1:318344/150‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                GAACAGGAACTGATCGACCTGACCGCGCGCGCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTGGTGCTGGCAATCCTGGCCGAAAGCGTGGCGACGCGAGGTTAATAACCATGCAAGGCGCGATGATACGTCAGCAGCAACCCGTTACCGGCCGTA  >  NC_002947/1526579‑1526863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.