| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3637851 | 18 (1.080) | 6 (0.360) | 4/286 | 1.6 | 27.3% | coding (2284/2481 nt) | PP_3202 | transporter |
| ? | NC_002947 | = 3637872 | 14 (0.840) | coding (2305/2481 nt) | PP_3202 | transporter | |||||
GTCATGCTCACCGGTATCACCCTGGCCATCGGCGTTGGTACCTGGATCTTCTCGCCGATCAAGTTCCAGGCCGACATGGGCGTGCTGCTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3637758‑3637851‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATGTTCCAGACGAACATGAAT < NC_002947/3637872‑3637850 GTCATGCTCACCGGTATCACCCTGGCCATCGGCGTTGGTACCTGGATCTTCTCGCCGATCAAGTTCCAGGCCGACATGGGCGTGCTGCTGGCATTCATGTTCCAGACGAACATGAAT > 1:143244/1‑117GTCATGCTCACCGGTATCACCCTGGCCATCGGCGTTGGTACCTGGATCTTCTCGCCGATCAAGTTCCAGGCCGACATGGGCGTGCTGCTGGCATTCATGTTCCAGACGAACATGAAT < 2:143244/117‑1 AGGCCGACATGGGCGTGCTGCTGGCATCCATGTTCCAGACGAACATGAA < 1:163338/49‑1 AGGCCGACATGGGCGTGCTGCTGGCATCCATGTTCCAGACGAACATGAA < 1:163339/49‑1 AGGCCGACATGGGCGTGCTGCTGGCATCCATGTTCCAGACGAACATGAA > 2:163338/1‑49 AGGCCGACATGGGCGTGCTGCTGGCATCCATGTTCCAGACGAACATGAA > 2:163339/1‑49 GTCATGCTCACCGGTATCACCCTGGCCATCGGCGTTGGTACCTGGATCTTCTCGCCGATCAAGTTCCAGGCCGACATGGGCGTGCTGCTGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3637758‑3637851‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATGTTCCAGACGAACATGAAT < NC_002947/3637872‑3637850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |