| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3773205 = | 5 (0.300) | 3 (0.190) | 3/264 | 1.8 | 38.4% | coding (653/1494 nt) | PP_3331 | membrane protein |
| ? | NC_002947 | 3773238 = | 5 (0.320) | coding (686/1494 nt) | PP_3331 | membrane protein | |||||
AATACCCACAGCACCAGCACCGTGCCGAACAGTAGCCCGCCGATGTGGTGCCAGCGCAGCCAGCCGCCAGGGTAGGGGCTGCACGAGCCGCTGCGATAGCGCTTGCGCAGCCGCAGGCGCAGTATGCCAACGGTCATGCCCAGGAGCGCCATGACCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3773364‑3773205‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgaccgttgGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGCACCACATCGGCGGGCTACTGTTCGGCACGGTGCTGGTGC > NC_002947/3773238‑3773354 AATACCCACAGCACCAGCACCGTGCCGAACAGTAGCCCGCCGATGTGGTGCCAGCGCAGCCAGCCGCCAGGGTAGGGGCTGCACGAGCCGCTGCGATAGCGCTTGCGCAGCCGCAGGCGCAGTATGCCAACGGTCATGCCCAGGAGCGCC > 1:254047/1‑150AATACCCACAGCACCAGCACCGTGCCGAACAGTAGCCCGCCGATGTGGTGCCAGCGCAGCCAGCCGCCAGGGTAGGGGCTGCACGAGCCGCTGCGATAGCGCTTGCGCAGCCGCAGGCGCAGTATGCCAACGGTCATGCCCAGGAGCGCC > 1:94919/1‑150 GTGCCAGCGCAGCCAGCCGCCAGGGTAGGGGCTGCACGAGCCGCTGCGATAGCGCTTGCGCAGCCGCAGGCGCAGTATGCCAACGGTCATGCCCAGGAGCGCCATGACC < 1:36820/109‑1 GTGCCAGCGCAGCCAGCCGCCAGGGTAGGGGCTGCACGAGCCGCTGCGATAGCGCTTGCGCAGCCGCAGGCGCAGTATGCCAACGGTCATGCCCAGGAGCGCCATGACC > 2:36820/1‑109 CAACGGTCATGCCCAGGAGCGCCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGCACCACATCGGCGGGCTACTGTTCGGCACGGTGCTGGTGC > 2:278754/1‑150 AACGGTCATGCCCAGGAGCGCCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCT < 1:202025/98‑1 AACGGTCATGCCCAGGAGCGCCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCT > 2:202025/1‑98 AATACCCACAGCACCAGCACCGTGCCGAACAGTAGCCCGCCGATGTGGTGCCAGCGCAGCCAGCCGCCAGGGTAGGGGCTGCACGAGCCGCTGCGATAGCGCTTGCGCAGCCGCAGGCGCAGTATGCCAACGGTCATGCCCAGGAGCGCCATGACCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3773364‑3773205‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgaccgttgGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGCACCACATCGGCGGGCTACTGTTCGGCACGGTGCTGGTGC > NC_002947/3773238‑3773354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |