New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4647267 =	18 (1.080)	4 (0.240)	4/280	1.6	19.7%	coding (420/483 nt)	PP_5658	hypothetical protein
	?	NC_002947	4647285 =	15 (0.920)					coding (438/483 nt)	PP_5658	hypothetical protein
Rejected: Frequency below/above cutoff threshold.

GTGGGTGGACGGATTCCACCAAGTTAGCAGACCGGTGGAATCCTGCCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCAGGCCGCTGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4647391‑4647267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCCGTGAAGTGGATGGCCAGTGGATGCTGCAAGCCCAGACCGACTGACGGCCCGGTGGCAGGG  >  NC_002947/4647285‑4647346                                                                                                                                                                                             GTGGGTGGACGGATTCCACCAAGTTAGCAGACCGGTGGAATCCTGCCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCAGGCCGCTGGCCGGCCCGTGA                                                          <  1:257440/131‑1 GTGGGTGGACGGATTCCACCAAGTTAGCAGACCGGTGGAATCCTGCCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCAGGCCGCTGGCCGGCCCGTGA                                                          >  2:257440/1‑131                                                                                                   ACTTCACGGGCCAGGCCGCTGGCCGGCCCGTGAAGTGGATGGCCAGTGGATGCTGCAAGCCCAGACCGACTGACGGCCCGGTGGCAGGG  <  1:250555/89‑1                                                                                                   ACTTCACGGGCCAGGCCGCTGGCCGGCCCGTGAAGTGGATGGCCAGTGGATGCTGCAAGCCCAGACCGACTGACGGCCCGGTGGCAGGG  >  2:250555/1‑89                                                                                                                                                                                             GTGGGTGGACGGATTCCACCAAGTTAGCAGACCGGTGGAATCCTGCCCTGCCACCGGGCCGTCAGTCGGTCTGGGCTTGCAGCATCCACTGGCCATCCACTTCACGGGCCAGGCCGCTGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4647391‑4647267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCCGTGAAGTGGATGGCCAGTGGATGCTGCAAGCCCAGACCGACTGACGGCCCGGTGGCAGGG  >  NC_002947/4647285‑4647346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.