New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2458799 =	16 (0.960)	4 (0.290)	4/234	1.3	29.5%	intergenic (+85/‑96)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
	?	NC_002947	2458863 =	6 (0.440)					intergenic (+149/‑32)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein

TTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCA  >  NC_002947/2458662‑2458940                                                                                                                                          |                                                                                                                                              ttCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAc                                                                                                                                   <  2:198616/150‑1 (MQ=255)       gtagctgctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAAACAGCTc                                                                                                                             <  1:232949‑M1/19‑1 (MQ=255)          tGGAAGACATGGCTGGTGTGAACCCGCCAGCGGTTCCACGCTGATTCGCTTGTAAGGCACTGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTa                                                                                                                          <  2:267601/150‑1 (MQ=255)            tgctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctttgcgcacagtagggtttctcggttgcctgtgctggcctcTTCGCGGGTAAACCCGCTCCTact                                                                                                                        >  1:154671‑M1/127‑149 (MQ=255)            tgctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTCCTACa                                                                                                                        >  1:60782‑M1/127‑150 (MQ=255)              ctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTCCTACAgg                                                                                                                      >  2:133135‑M1/125‑150 (MQ=255)                aCATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAAGCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTAGAGGAt                                                                                                                    >  2:232949/1‑150 (MQ=255)                         gtgtGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGc                                                                                                           >  2:147193/1‑150 (MQ=255)                                   aggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgtcagtgccggccctTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGa                                                                                                 >  2:78539‑M1/104‑150 (MQ=255)                                    ggcgctccagggtggggccttgggtgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctaggttgtcagtgccggccctTTCGCGGGTAACCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAg                                                                                                >  2:270196‑M1/103‑150 (MQ=255)                                       gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCgg                                                                                             <  1:383200/150‑1 (MQ=37)                                       gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg                                                                                             <  1:285831/150‑1 (MQ=255)                                       gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCgg                                                                                             <  2:313833/150‑1 (MQ=25)                                        cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCggg                                                                                            <  1:341999/150‑1 (MQ=255)                                                           gtGTAAGGCAATGAAAAAAGGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                         <  2:229690/149‑1 (MQ=255)                                                                      tGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCGCCTCCAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAAc                                                              <  2:310019/150‑1 (MQ=255)                                                                         aaaaaCGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGAGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga                                                           <  1:147193/150‑1 (MQ=255)                                                                           aaaCGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg                                                                                                   >  1:285301/1‑108 (MQ=255)                                                                           aaaCGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg                                                                                                   <  2:285301/108‑1 (MQ=255)                                                                                         agtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGc                                                                                               >  1:82859‑M1/50‑98 (MQ=255)                                                                                         agtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGc                                                                                               <  2:82859‑M1/49‑1 (MQ=255)                                                                                                 ttttttttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCAACTAAAGGTTGATCGCTGCCCCGGTAGGATCGGGTTTAACCCCGAAGAGGGCAGCACCGGCACCCGACGAACCCAACGGTGCGCACAGccc                                   >  1:350150/2‑150 (MQ=255)                                                                                                                        gttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTc            <  2:314221/150‑1 (MQ=255)                                                                                                                                  ccGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCa  >  2:248980/1‑150 (MQ=255)                                                                                                                                          |                                                                                                                                              TTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCA  >  NC_002947/2458662‑2458940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.